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Name : PputW619_3475 (PputW619_3475) Accession : YP_001750327.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3826562 - 3828172 bp Length : 1611 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3568 ABC transporter, ATP-binding protein DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTACGCGACCTGGCGGTGGAGTTCGTTACCGGCGAACAGGTCAACCGTGTGGTCGA TGGCATCAGCTTCGACATCCGCAAGGGTGAGACCCTGGCGCTGGTCGGCGAGAGCGGTTCGGGCAAATCCGTTACCGCCC ACTCGATTCTGCGCCTGCTGCCCTACCCACTTGCACGTCACCCCAGCGGCAGCATCGGCTATGAAGGCAAGGACTTGCTG CAGCAAGGTGAGAAGGCCATGCAGAAGATTCGCGGCAACCGCATCGCGATGATCTTCCAGGAGCCGATGACCTCGCTGAA CCCGCTGCACTGCATCGAGAAGCAGATCAACGAAATCCTGCTGCTGCACAAGGGCCTCACCGGCAAGCAAGCCACTGCGC GCACGCTGGAGCTGCTTGAGCTGGTAGGCATTCCCGAGCCACGCAAGCGCCTGAAGGCCCTGCCCCACGAGCTGTCCGGT GGCCAGCGGCAGCGGGTGATGATTGCCATGGCGCTGGCCAATGAGCCGGAGTTGCTGATTGCCGATGAACCTACCACCGC ACTCGACGTGACCGTGCAGCTGAAGATTCTGGAGCTGCTCAAGGAACTGCAGGCGCGGTTGGGCATGGCATTACTGCTGA TCAGCCATGACCTGAACCTGGTAAGGCGCATCGCCCACCGTGTTTGCGTGATGCAGCGTGGGCAAATTGTCGAACAGGCC GATTGCGCGACGCTGTTCACTGCGCCGCAGCACCACTACACGCAGATGCTGATCAATGCCGAGCCCAGCGGTTTGCCGGC ACATAATCCAGTTGGCGCACCGCTGCTGGAAGTGAACGACCTGAAGGTATGGTTCCCGATCAAGAAAGGCTTGCTGCGCA AGACGGTCGACCATGTGAAGGCGGTGGACGGGATCAACTTCAGTTTGCCGCAAGGGCAGACACTGGGGATCGTGGGTGAG TCCGGATCGGGCAAGTCGACGCTAGGGCTGGCGATCTTGCGCCTGATTTCGAGCCAGGGTGGCATTCGCTTCCATGGCCA GGCGCTGGAAGGCTTGAACCAGAAGCAGGTGCGGCCACTGCGACGCGAGATGCAAGTGGTGTTTCAGGACCCCTTTGGTA GCCTCAGCCCACGCATGTGTGTGGCGGATATCGTTGGCGAGGGGCTACGGATTCACAAGATTGGTACAGCCGCAGAACAG GAAGCGGCAATTATCGCGGCGCTGGAAGAGGTAGGCCTGGACCCTCGCACGCGCCACCGCTACCCGCATGAGTTTTCGGG TGGGCAACGTCAACGTATCGCCATCGCCCGGGCGCTGGTGCTCAAGCCGGCGTTGATTCTGCTGGACGAACCGACGTCTG CGCTGGATCGTACGGTGCAGCGGCAGGTGGTGGAATTGCTGCGCAACTTGCAGCAGAAGTACAACCTCACCTACCTGTTC ATCAGCCATGACCTTGCCGTGGTCAAAGCGTTGAGTCACCAACTGATGGTGATCAAGCAGGGGCATGTTGTGGAGCAAGG CGAGGCTCAGCAGATCTTCCATTCACCCCAGCACACTTATACGCAGCAACTGTTGGAGGCGGCGTTTTTGCGTCATGACA ATGAACGGTGA Protein sequence : MSEQNLIEVRDLAVEFVTGEQVNRVVDGISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIGYEGKDLL QQGEKAMQKIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKQATARTLELLELVGIPEPRKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA DCATLFTAPQHHYTQMLINAEPSGLPAHNPVGAPLLEVNDLKVWFPIKKGLLRKTVDHVKAVDGINFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQALEGLNQKQVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHKIGTAAEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKQGHVVEQGEAQQIFHSPQHTYTQQLLEAAFLRHDNER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-73 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-73 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 9e-73 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-73 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-94 | 42 |
