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Name : PputW619_3404 (PputW619_3404) Accession : YP_001750257.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3746079 - 3747359 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTCCAAACTGTTACGCGGCCAACTTCAGGAAGTGGCGGACCGCCTCGCCTCCCGTGGCTTCAGCCTGGATGT CGCGCGCATCGAATCGCTGGAAGAGCGCCGCAAGGCGGTGCAGACCCGCACCGAGCAGCTGCAGGCCGAGCGTAACGCCC GCTCCAAATCGATCGGCCAGGCCAAAGCCAAGGGCGAGGACATCGCGCCGCTGATGGCTGATGTCGAGCGCATGGCCAAT GAGCTGGCCGCTGGCAAGGTCGAGCTGGACGGCATCCAGGCCGAACTGGATGGCATTGTCCTGACCATCCCCAACCTGCC GGACGCCAGCGTGCCGGTCGGTGCCAGTGAGGACGACAACGTCGAAGTGCGCCGTTGGGGCACCCCGAGGGCATTCGATT TTGCAATCAAGGACCACGTCGCCCTGGGCGAGATCAGCGGTGGCCTGGACTTCGAAGCAGCTGCCAAGCTGTCGGGCGCC CGCTTTGCCGTGCTGCGCGGCCCGATTGCCCGCCTGCACCGTGCCCTGGCGCAGTTCATGATCAACCTGCACACCGGTGA GCATGGCTACGAAGAACACTACACCCCGTACCTGGTCCAGGCTCCGGCCTTGCAGGGCACCGGCCAGTTGCCGAAATTCG AGGAAGACCTGTTCAAGATCACCCGCGAAGGCGAAGCCGACTTCTACCTGATCCCGACCGCTGAAGTGTCGCTGACCAAC CTGGTGGCCGGCGAGATTATCGACGCCAAGCAGCTGCCGCTCAAGCTGGTCGCCCACACCCCGTGCTTCCGCAGTGAAGC TGGCGCTTCGGGCCGTGACACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGGTGGTCGAGC CGTCCAAGTCCATGGAAGCCCTGGAAGGCCTCACCGCCAACGCCGAGCGCGTGTTGCAGCTGCTGGAACTGCCCTACCGC GTACTGGCCCTGTGCACCGGTGACATGGGCTTCGGCGCCGTGAAGACCTACGACCTGGAAGTGTGGGTGCCGAGCCAGGA CAAGTACCGCGAGATCAGCTCCTGCTCCAACTGTGGTGACTTCCAGGCGCGCCGCATGCAGGCCCGCTGGCGCAACCCGG AAACCGGCAAGCCGGAGCTGGTGCATACCCTCAATGGCTCGGGCCTGGCTGTAGGCCGTACCCTGGTCGCTGTGCTGGAA AACTACCAGCAGGCTGATGGCTCCATTCGTGTGCCGGAAGTGCTCAAGCCCTACATGGGCGGTGTCGAGGTCATCCGCTA A Protein sequence : MLDSKLLRGQLQEVADRLASRGFSLDVARIESLEERRKAVQTRTEQLQAERNARSKSIGQAKAKGEDIAPLMADVERMAN ELAAGKVELDGIQAELDGIVLTIPNLPDASVPVGASEDDNVEVRRWGTPRAFDFAIKDHVALGEISGGLDFEAAAKLSGA RFAVLRGPIARLHRALAQFMINLHTGEHGYEEHYTPYLVQAPALQGTGQLPKFEEDLFKITREGEADFYLIPTAEVSLTN LVAGEIIDAKQLPLKLVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSKSMEALEGLTANAERVLQLLELPYR VLALCTGDMGFGAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMGGVEVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-107 | 55 |
