Gene Information

Name : PputW619_3375 (PputW619_3375)
Accession : YP_001750228.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3718473 - 3719111 bp
Length : 639 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3450 response regulator GacA (global antibiotic and cyanide control protein, LuxR/UhpA family)

DNA sequence : 
TTGATTAGGGTCCTAGTGGTCGATGACCACGATCTGGTGCGAACCGGTATTACACGCATGCTGGCCGACATCGACGGCTT
GCAGGTAGTGGGGGAGGCGGACTCGGGCGAGTCGGCGCTCAAGCTGGTCCGGGAGCTCAAGCCGGATGTCGTGCTGATGG
ACGTCAAGATGCCTGGCATTGGTGGCCTTGAGGCTACCCGCAAATTGTTGCGCAGCCACCCTGACACCAAGGTGGTGGCC
GTGACCGTGTGTGAAGAAGACCCGTTCCCCACGCGCCTGATGCAAGCCGGGGCAGCCGGCTACCTGACCAAAGGCGCGGG
GCTGGACGAGATGGTCCAGGCCATCCGTCTGGCGTTTGCCGGGCAGCGTTATATCAGCCCGCAAATTGCCCAGCAACTGG
CGCTCAAGTCGTTCCAGCCGCAAGGTTCGCCGTTCGACGCCCTGTCGGAGCGGGAAATCCAGATCGCCCTTATGATCGTC
GGTTGTCAGAAGGTTCAGCTCATCTCGGACAAGTTGTGCCTGTCGCCCAAGACCGTCAATACTTACCGGTATCGGATCTT
TGAAAAACTCTCGGTCACCAGCGACGTCGAACTGACCTTGCTGGCCGTTCGCCACGGTATGGTCGACGCAAGCCTCTGA

Protein sequence : 
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGEADSGESALKLVRELKPDVVLMDVKMPGIGGLEATRKLLRSHPDTKVVA
VTVCEEDPFPTRLMQAGAAGYLTKGAGLDEMVQAIRLAFAGQRYISPQIAQQLALKSFQPQGSPFDALSEREIQIALMIV
GCQKVQLISDKLCLSPKTVNTYRYRIFEKLSVTSDVELTLLAVRHGMVDASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-51 56
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-51 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3375 YP_001750228.1 two component LuxR family transcriptional regulator VFG1889 Protein 3e-49 54