Gene Information

Name : PputW619_3372 (PputW619_3372)
Accession : YP_001750225.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3713885 - 3715690 bp
Length : 1806 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: net:Neut_0006 phage integrase family protein

DNA sequence :
ATGGCACTCACGGAAATGGCGATTCGGCATGCTCGAGTCACTGCCAAGGAGTACACGCTCGCAGACAGTGATGGCTTGTT
CCTCAACGTCACTGCCCAGGGCAGCAAAATCTGGCATTTCCGTTATTACTGGGAAGGTCGGCAGAAGCGCATGTCCTTCG
GCAGTTACCCGCAGGTGGGGTTGCGTGACGCGCGGGAGCGGCGAGATGAGGCACGAGCGCTGATTGCTCAGGGATTCAAT
CCCTGTGAACAACGCAAGCAGCAGCGTGTGGCCCTGCGCCTTGCCAATGATCAGACCTTCGATGCGGTGTTCGAGCAGTG
GATTGCCTTTCGCAGGTTGAGTCTCAAAGAAGGGCGACAGAGCACGCTGTCGCAGATACTGCGCATTTTTGCCAAAGACA
TTCAGCCCTACATCGGCGAGCAGTCGATCCATGAGATCAATCGGCATGTACTCATGGATCTGCTCAGCCGTATCGAATGC
AGGAAAGCCTTCACGACTGCGGAGAAGTGCCGGACCTGGCTCAATCAGTTGTTCCGCTACGCACTGGTACGCATAGCGGG
CCTTGAACACAATCCTGCCGCAGATCTCGATGTGGTGGCGGTGCCCAAGCCGCCGGTGGAGCACAATCCCTTCCTGCGCA
TGGAGGAGCTTCCGCACTTCCTGGGTAAGCTGCGTGCGTTCCGCGGCTCGCAGCAGACGCAACTCGGTATCCGCTTGTTG
CTGTTGACCGGCGTGCGTACTGGTGAGTTGCGTCTGGCGACCCCTGACCAGTTCGACCTGGAGCGTAGGCTTTGGATCAT
CCCGCCGGAAGTGGTCAAGCAGCTCCAGCTCAAGATGCGCAACACGCGCCGCCAAACCGCCAAGGTGCCGCCCTATATCG
TTCCGCTGTCTATCCAGGCGGCCGAAGTCGTGCGCCTGTTGCTCGATCAGGTGGTGCCCGCTCAACGGCATTTGCTCACC
CATCGAAGCGATCTGAGCAAGCGCATCAGCGAGAACACCCTGAACAGTGCGTTGCGACGTATGGGCTTTGCTGACCGGCT
CACGGGGCACGGCGTGAGGGCGACGATCTCAACGGCACTCAACGAGATCGGTTACCCGAAGATCTGGATCGATGCGCAGC
TGTCACATGCTGATCCGGACAAGGTGAGTTCAGCGTACAACCATGCGGAATACGTTGAGCAACGCCGTACGATGATGCAA
GACTGGGCCAACCGATTAGATCTCTGGGTGCAAGGACATACCAAGGCGGCAGCCTCACCGTTAACTATTCGCTTGGAGGG
GGTATCGCAGCTGTCGTTCGGGCTACAGAGTTTACTTCTCCCTCCCGTACGCAGTGGCATGAAACCAGAAATGAGTTCGT
TAGACGTTGAAGGTAGTAAGGCTTTAGCGGATCGATTCGGCGCGTCGGAAGTGTCTGCCGTCCGGCTGGTTTCTGATATC
CAAAGAGAGCGTGCGGAGATGCTTGAAATCTACGAAGCAGCGACCAATTTACCTCTTCTCTCTTTTGCACGGCTGGCTGG
AAAATCGCGAGATCAAATCAACCGTGATATCAAGGCACGACGTCTGCTGTCACTTAGCTTGGGGAATCGGGGCCAGCGTA
TTCCAGACTGGCAGTTGGATCCGGTGAAGCATAAGCTGGTTCTGGCAATCTTCAAGTCGTTGCCTCAACTCGAAGCCTGG
GAAGTCTACCGTCTGCTCAGTGAGCCACACGATAGGCTGAGAGGGCGTATACCGCTAGATGTGGTGCAAACAGAGAATTT
TGAGACTACCTTGGCTTCACTGATTCGGGTGCGACAAATAGCATAG

Protein sequence :
MALTEMAIRHARVTAKEYTLADSDGLFLNVTAQGSKIWHFRYYWEGRQKRMSFGSYPQVGLRDARERRDEARALIAQGFN
PCEQRKQQRVALRLANDQTFDAVFEQWIAFRRLSLKEGRQSTLSQILRIFAKDIQPYIGEQSIHEINRHVLMDLLSRIEC
RKAFTTAEKCRTWLNQLFRYALVRIAGLEHNPAADLDVVAVPKPPVEHNPFLRMEELPHFLGKLRAFRGSQQTQLGIRLL
LLTGVRTGELRLATPDQFDLERRLWIIPPEVVKQLQLKMRNTRRQTAKVPPYIVPLSIQAAEVVRLLLDQVVPAQRHLLT
HRSDLSKRISENTLNSALRRMGFADRLTGHGVRATISTALNEIGYPKIWIDAQLSHADPDKVSSAYNHAEYVEQRRTMMQ
DWANRLDLWVQGHTKAAASPLTIRLEGVSQLSFGLQSLLLPPVRSGMKPEMSSLDVEGSKALADRFGASEVSAVRLVSDI
QRERAEMLEIYEAATNLPLLSFARLAGKSRDQINRDIKARRLLSLSLGNRGQRIPDWQLDPVKHKLVLAIFKSLPQLEAW
EVYRLLSEPHDRLRGRIPLDVVQTENFETTLASLIRVRQIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAN62223.1 putative integrase Not tested PAGI-3(SG) Protein 7e-138 68
int AAN62094.1 putative integrase Not tested PAGI-2(C) Protein 1e-163 59
unnamed AFG30104.1 Int Not tested PAGI-2 Protein 8e-156 56