Gene Information

Name : PputW619_3309 (PputW619_3309)
Accession : YP_001750163.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3648704 - 3649366 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2757 DNA-binding response regulator

DNA sequence : 
ATGCGGCTGTTGCTGGTTGAGGATGACATTGCACTGGGGGAAGGGATCTGCGACGGCTTGCGCCAGGAGGGCTACACCCT
CGACTGGCTGCGTGATGGCGTCAGCGGCTTGCATGCGTTGCAGCACGAGACCTTCGATCTGGTGATTCTGGATCTGGGCT
TGCCCCGTATGGATGGCATTGAACTGCTGCGGCGGGTACGCGCCGGTGGTGACAGCCTGCCGGTGCTGATACTCACCGCA
CGGGACGCCCTCGACGATCGTATCACCGGCTTGGACGCCGGTGCCGACGATTATCTGGTCAAGCCGTTCGACCTCAACGA
GTTGAAGGCGCGCCTCAGGGCTTTGCTGCGGCGCAGCGCCGGGCGCGCCAAGGTGTTGATCGAACATGCCGGGGTCAGCC
TCGACCCGGCCACCCAGCAGGTTCACTACCACGGCGTTGAAGTGGTGCTGACCCCGAAGGAATACGTGCTGTTGCACGAA
CTGCTGGCGCAACCCGGCAAGGTATTCACCCGTGAACGGCTGACCCAGCTGCTGTATGGCTGGGACGAGGAGCCCGAGAG
CAATACCTTGGAGGTGAACATCTACCACCTGCGCAAGAAGCTGTTCAACGGCCTGATTCGCACGGTGCGCGGTATTGGTT
ACCTGGTCGAGGCCAAAGCATGA

Protein sequence : 
MRLLLVEDDIALGEGICDGLRQEGYTLDWLRDGVSGLHALQHETFDLVILDLGLPRMDGIELLRRVRAGGDSLPVLILTA
RDALDDRITGLDAGADDYLVKPFDLNELKARLRALLRRSAGRAKVLIEHAGVSLDPATQQVHYHGVEVVLTPKEYVLLHE
LLAQPGKVFTRERLTQLLYGWDEEPESNTLEVNIYHLRKKLFNGLIRTVRGIGYLVEAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-31 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-26 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3309 YP_001750163.1 two component transcriptional regulator BAC0487 Protein 1e-31 49
PputW619_3309 YP_001750163.1 two component transcriptional regulator NC_002516.2.879194.p Protein 3e-26 43
PputW619_3309 YP_001750163.1 two component transcriptional regulator BAC0197 Protein 7e-29 42
PputW619_3309 YP_001750163.1 two component transcriptional regulator Y16952.3.orf35.gene. Protein 8e-26 41
PputW619_3309 YP_001750163.1 two component transcriptional regulator BAC0308 Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3309 YP_001750163.1 two component transcriptional regulator VFG0473 Protein 1e-36 48
PputW619_3309 YP_001750163.1 two component transcriptional regulator VFG0596 Protein 9e-27 42