Gene Information

Name : PputW619_3303 (PputW619_3303)
Accession : YP_001750157.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3642386 - 3642940 bp
Length : 555 bp
Strand : +
Note : PFAM: Lytic transglycosylase catalytic; KEGG: pfo:Pfl_3010 lytic transglycosylase, catalytic

DNA sequence :
ATGGCAGCGTATCGACTGATCCTGGCGCTGGCCTTGACCGGCACTACGGCCGTTCATGCGGGCTCGCTGCCGCCGCCGGC
GTATCAACTGGCCGCCGAGCGCGCTGGCATCCCAGCGTCAGTGCTGTTCGCCATCGCCCTGCAGGAGAGCGGTACGCCGC
TGCGGGGTCACCTCATGCCCTGGCCTTGGACCTTGAATGTCGCCGGCACACCGCTGCGCTTCGCCCGCCGTGATGAGGCG
TGTGCTGCACTCAAGCAGGCGCTGATCCGCCACGACCCCAAGCGCATCGATGTCGGGCTGGGGCAGACCAACCTCGGCTA
CCACCTGGACCGCTATCACAGTGCCTGCGAGGCCCTCGATCCACGCGCCAACCTGGCTGTGACTGCCGAGCTGCTGCGCG
CCCACTATGCCGACAGCGGTGACTGGGTCGTGGCGGCAGGCCGCTATCACCGTCCTGCCGGCGGTAAACCCGCAGCGCAG
TACCGCCGACAGTTCAGCCAGCACTGGCAGCGGGTTCAGGCAGTTGTGGGATCTCCGAGAGGGCCACGGCCATGA

Protein sequence :
MAAYRLILALALTGTTAVHAGSLPPPAYQLAAERAGIPASVLFAIALQESGTPLRGHLMPWPWTLNVAGTPLRFARRDEA
CAALKQALIRHDPKRIDVGLGQTNLGYHLDRYHSACEALDPRANLAVTAELLRAHYADSGDWVVAAGRYHRPAGGKPAAQ
YRRQFSQHWQRVQAVVGSPRGPRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-45 64
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-42 60
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 6e-42 59
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-26 48
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 2e-26 48
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-29 48
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 4e-22 47
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 4e-22 47
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 3e-22 46