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Name : PputW619_3295 (PputW619_3295) Accession : YP_001750149.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 3635452 - 3637419 bp Length : 1968 bp Strand : + Note : KEGG: pfo:Pfl_3001 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topois DNA sequence : ATGCGCCTGTTCATCTGCGAGAAACCTTCCCAAGCCCGCGACATCGCCCGGGTGCTGCAGGCCAGCCGCCGCGGTGATGG TTGCCTGACGGGTCAGAACCTCACCGTCACCTGGTGCGTCGGTCATCTGCTGGAGACCGCGCCTCCTGAAACCTATGGCG ATTACAAACGCTGGTCGCTGGACGACCTGCCGATCATTCCCAGCCGCTGGCAACTGGTGGCCAAACCCAAGGTCGCTGGC CAGCTGAAGGTGATCAGCCAGCTGCTGCGCACTTGCAGCGAAGTGGTGATCGCCACCGACGCCGACCGCGAAGGCGAGAT GATCGCCCGGGAGATTCTCGAACGATGCCAGTATCAGGGGCCGATTCTGCGCCTGTGGCTGTCCGCGTTGGATGAAACAT CGATCCGTCGAGCCTTGAGCGCATTGCGCCCGGGGGAGCAGACCTTGCCGCTGTACCACTGTGCACTCGCCCGCTCCCGT GCCGATTGGCTGGTCGGCATCAACTTGAGCCGGCTGTTCACGCTGCTCGGCCGCCGCGCTGGCTTCGATGGCCTGCTGCC GGTGGGACGTGTGCAAACCCCCACCTTGCGCCTGGTGGTCGAGCGCGACCGGGCGATCGCCAGCTTTGTGCCGCTACCAT TCTGGACCGTCGATGCGCACCTGGAACAGGACGGGATCCGTTTTCACGCGCGCTGGCAGGCCCCGAACGCGGTCAGCGAT GCGGTTGGACGCTGTATCGACGAAACCGCCGCGCAGCAGGCGCTCAGGCGCCTCACTCAAGCTGGCAGCGCACAGATCGA CAGCGTCGAGGTCGAGCGGGTGCGGGAAGGTCCGCCACTGCCGTTCGACCTGGGCACGCTGCAGGAGATCTGCTCGGCCA AGCTCGGACTCGGAGCACAGGAGACCCTGGCCACTGCCCAGGCCCTGTACGAGACCCACAAGGTGACGACCTACCCGAGA AGCGACTGCGGCTACTTGCCGGAGAGCATGCTCGATGAGGTGCCGCGCGTCCTTCACGCCTTGGCCGCCGCCGCACCATC GCTGGGGGAAATCCTCAAGGAGGTCGACCCCAGCCGCCGCTCCCGTGCCTGGAACAGCAGCAAGATCACCGCGCACCACG GCATCATTCCCACCGCCGTCACGCTGGATTTGGCGCAGCTCTCCGAGCGCGAGCGTGCGGTTTACACGCTGATTCGCGCA CGCTACCTCGCGCAGTTCATGCCCGAGCACGAGTACCTGAAAACCCAGGCGCAGTTGCACAGCCAGGCAGATCACCTGGT GGCGCGCGGCAAACAGATCCTGGCCCGCGGCTGGAAGGCAGTGATCAACGAGGCCGACGGTAACGAGCCGGCCGAACAGG CGCAGCGATTACCCACGTTGCGTGAATCCGCGACGGTGGCGCTGATCGACGCCACCCTCAACGCACAGCGCACACAACCG CCCAAGGCCTACACCGAAGGCACCCTGGTCAGAGCGATGAAAACCATCGCCAACCAGGTGGCTGATTCGCGGCTCAAGCA GAAGCTCAAGGACAGCTGCGGGCTCGGTACCGAGGCCACCCGCGCGGCCATCATCCAGGGCCTGATCGATCACGGTTACC TGACCAAGAAGAAACGCAGCCTGGCTGCCTCCGCGGCGGCGCATACCTTGATCGAAGCGGTGCCACCAGAGGTGGCCGAC CCGGTCATGACCGCACTGTGGGAGCAGGCGCTGGACCGTATCGAGTCGGGCCAACTGAGCGTCGAGACCTTTCTCGCCAA GCAGACAGAATGGCTGACTCGACTGGTGCGCAGTAACGCGACGCTCACCCTGCGCCCGCCCCCCAGCAAGGGGCCCTTCT GCCCGGTCTGCCGCAGCGCCATGCGCCAACGCAAAGGTCGCACCGGCAGCTTCTGGTCGTGTATCCGCTACCCCGAATGC AAGGGCACCAAACCGGTGGCAAAAACCAAGCGGGCGAAAAACACATGA Protein sequence : MRLFICEKPSQARDIARVLQASRRGDGCLTGQNLTVTWCVGHLLETAPPETYGDYKRWSLDDLPIIPSRWQLVAKPKVAG QLKVISQLLRTCSEVVIATDADREGEMIAREILERCQYQGPILRLWLSALDETSIRRALSALRPGEQTLPLYHCALARSR ADWLVGINLSRLFTLLGRRAGFDGLLPVGRVQTPTLRLVVERDRAIASFVPLPFWTVDAHLEQDGIRFHARWQAPNAVSD AVGRCIDETAAQQALRRLTQAGSAQIDSVEVERVREGPPLPFDLGTLQEICSAKLGLGAQETLATAQALYETHKVTTYPR SDCGYLPESMLDEVPRVLHALAAAAPSLGEILKEVDPSRRSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRA RYLAQFMPEHEYLKTQAQLHSQADHLVARGKQILARGWKAVINEADGNEPAEQAQRLPTLRESATVALIDATLNAQRTQP PKAYTEGTLVRAMKTIANQVADSRLKQKLKDSCGLGTEATRAAIIQGLIDHGYLTKKKRSLAASAAAHTLIEAVPPEVAD PVMTALWEQALDRIESGQLSVETFLAKQTEWLTRLVRSNATLTLRPPPSKGPFCPVCRSAMRQRKGRTGSFWSCIRYPEC KGTKPVAKTKRAKNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 59 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 57 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 57 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 8e-146 | 47 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 9e-155 | 47 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-154 | 46 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-154 | 46 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-154 | 46 |
