Gene Information

Name : PputW619_3292 (PputW619_3292)
Accession : YP_001750146.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3634119 - 3634547 bp
Length : 429 bp
Strand : +
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACTTTGTTTGTTGGTGAAGGCAACATCGGCAGCGTGCCGGAGTATCAGGAGTTCAACACCAACCCGGATGAGCC
GCGGCGCCTGCTGCGGCTGAATGTCTATTTCGACAACCCGGTACCGCGTGAAGGTGGCTACGAGGATCGCGGCGGCTATT
GGGCGCCCGTCGAGCTCTGGAACCGTGACGCCGAACACTGGGCCACGCTGTACCAGAAAGGCATGCGCGTTCTGGTTGAA
GGGCGCACGGTCAAGGAGGAATGGGAGGACAGCGAGGACAACGCCCGCGTGACGTTCAAGGTGGAGGCGCGGCGCATCGG
TATTCTGCCGCACCGCCTGGCCTCGGTGACCATGCGCGAGAAAGCCAGCGATAACGCCAATAGTTCGCGTAAAGGGGGTG
GCAAGAAGGCACCACGCAAGTCCGGGTAA

Protein sequence :
MSTLFVGEGNIGSVPEYQEFNTNPDEPRRLLRLNVYFDNPVPREGGYEDRGGYWAPVELWNRDAEHWATLYQKGMRVLVE
GRTVKEEWEDSEDNARVTFKVEARRIGILPHRLASVTMREKASDNANSSRKGGGKKAPRKSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 1e-45 70
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 1e-38 58
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 7e-26 56
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 1e-26 51
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 4e-30 45