Gene Information

Name : PputW619_0325 (PputW619_0325)
Accession : YP_001747200.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 339641 - 340084 bp
Length : 444 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN5233 transcriptional regulator CadR

DNA sequence :
ATGAAAATCGGAGAATTGGCCAAAGCCACCGACTGTGCGGTGGAGACCATCCGTTACTACGAGCGTGAGCAGCTACTGCC
GGAGCCAGCACGTACCGACGGGAATTACCGCTTGTATACCCAGGCCCATGTCGAGCGGCTGACCTTCATACGCAACTGCC
GCACCCTGGATATGACGCTGGACGAGATACGCAGCCTTTTGCGCCTGCGCGATAGCCCAGCAGGCTCATGTGGCAGCGTC
AATGCGTTGATCGACGAACATATCGAACACGTGCAGGCGCGGATCAATGGTCTGGTGGCATTGCAGGAGCAACTGGTGGA
ATTACGCAGGCGGTGCAGTGCGCAGGGAGAGGAATGCGCGATCTTGCAGCGGTTGGAGGTAAACGGAGCAGTATCTGTGC
CGGATACCGAGCATTCGCACGTGGGGCGTAGCCACGGGCATTGA

Protein sequence :
MKIGELAKATDCAVETIRYYEREQLLPEPARTDGNYRLYTQAHVERLTFIRNCRTLDMTLDEIRSLLRLRDSPAGSCGSV
NALIDEHIEHVQARINGLVALQEQLVELRRRCSAQGEECAILQRLEVNGAVSVPDTEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-35 56
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-31 52
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 9e-32 52
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-31 52
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-31 52
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 6e-32 52
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 6e-32 52
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-32 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_0325 YP_001747200.1 MerR family transcriptional regulator BAC0058 Protein 8e-63 94
PputW619_0325 YP_001747200.1 MerR family transcriptional regulator BAC0301 Protein 3e-33 58