|
Name : PputW619_3190 (PputW619_3190) Accession : YP_001750049.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 3529145 - 3530506 bp Length : 1362 bp Strand : - Note : KEGG: pmy:Pmen_2354 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGGACCTCTGTGTGATCGGGGCAGGGTATGTAGGGCTGGTGACGGCAGCCTGTTTCGCCGGGATGGGCAACCGGGTGGT GTGCCTGGAGCGCGACCCGCACCGCCTGGCACAACTGCGTCAGGGCCAGTGTCCGATCCATGAACCGGGGCTGCAGGCAC TGCTGCAGTCTGGGGTCGGCCAAGGGCTGCTGAGCTTCAGCGACCAGTGGCAGCCGTCGCTGGCCAAGGCGCAGGTGGTG TTCATCGCTGTCGGCACGCCCAGCCAGGAAGATGGCTCGGCCGATCTGGAGCACGTGCTGGCCGTGGCCGACAGCCTTGG CCGCCATTTGCCGCGCAGTTGCCTGGTGGTCAACAAGTCCACCGTGCCAGTCGGCACCGCAGAGCGCGTGGCCCGGCACG TGATGCAGGGCCTGCGCGACCGCAGCGCCGGTTTTACTGTCGAGGTGGCGAGCAACCCGGAGTTTCTCAAGGAAGGCAGC GCCATCGACGATTTCATGCGCCCGGACCGCATCATCATCGGCACGGACAACGAGGCAGCACGGCAGTGCCTGCAACGCCT CTACGCGCCCTTTGTGCGCAATCGCGAACGTATCCTGGTGATGTCCCCGCGTGCGGCCGAGTTCAGCAAGTACGCAGCCA ATGCCTTCCTGGCAACCAAAATATCGTTCATCAATGAACTTGCCGGGCTGTGCGCACACCTGGGCGTGGACATAGAACAA GTGCGCCACGGCATTGGTAGCGACCGGCGCATCGGCAGCCATTTCATCTATGCCGGCTGTGGTTATGGGGGGTCATGCTT CCCGAAGGATATCCGCGCGTTGGTCCGCACAGCCGAGCAGCAAGGTTATCAGCCTGCAATCCTGCGGGCAGTACAAGCGC GCAACGATCAGCAGAAAACCCTGTTGTTCACCGCGCTGCAGCAGCATTTCGGTGGGTTCATGCGTGGGCGTACCGTGGCG GTATGGGGGCTGGCTTTCAAACCGGGCACCGATGACCTGCGCGAAGCGCCCAGCCTGGTGCTGCTCGATGCCTTGCTGGC CGCAGGTACACGCGTGCAGGCCTGTGACCCGGTGGCGCTGGCCGGGGTTGCCGAGCGCTATGCGCAGGCGCTGGCCAATG GCCAACTGAAACTCACCGATGACCCCTACGCCTGCGTGGAAGGTGCCGATGCACTGGCCCTGGTGACTGAATGGAAGCAG TTCCGCCAACCGGATTTCAGCCGTGTGCGCGGGCTGATGCGCATGCCGGTGATATTTGATGGCCGTAATATTTACGATCC CTTGGAACTATCTACACTGGGTTATCTCTATCATGGCATCGGTCGGCCGCAGGCGGGGCATTGTAAGGTGACTGCCGCCT GA Protein sequence : MDLCVIGAGYVGLVTAACFAGMGNRVVCLERDPHRLAQLRQGQCPIHEPGLQALLQSGVGQGLLSFSDQWQPSLAKAQVV FIAVGTPSQEDGSADLEHVLAVADSLGRHLPRSCLVVNKSTVPVGTAERVARHVMQGLRDRSAGFTVEVASNPEFLKEGS AIDDFMRPDRIIIGTDNEAARQCLQRLYAPFVRNRERILVMSPRAAEFSKYAANAFLATKISFINELAGLCAHLGVDIEQ VRHGIGSDRRIGSHFIYAGCGYGGSCFPKDIRALVRTAEQQGYQPAILRAVQARNDQQKTLLFTALQQHFGGFMRGRTVA VWGLAFKPGTDDLREAPSLVLLDALLAAGTRVQACDPVALAGVAERYAQALANGQLKLTDDPYACVEGADALALVTEWKQ FRQPDFSRVRGLMRMPVIFDGRNIYDPLELSTLGYLYHGIGRPQAGHCKVTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-42 | 42 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-42 | 42 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-42 | 42 |
