Gene Information

Name : PputW619_3019 (PputW619_3019)
Accession : YP_001749880.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3360660 - 3361322 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2757 DNA-binding response regulator

DNA sequence : 
ATGCGGCTGCTACTGGTTGAGGATGATACCGCTCTGGGGGAGGGGATCTGCGACGGGTTGCGCCAGGAGGGCTATACCCT
CGACTGGTTGCGCGATGGCCTGAGCGGGCTGCATGCCCTGCAACACGAAATGTTCGACCTGGTGATCCTCGACCTCGGGC
TGCCGCGGTTGGGTGGCATCGAGCTGCTGCGACGGCTGAGGGCAGGGGGCGACAGCCTACCGGTTCTGATCCTTACCGCG
CGCGATGCAACCGAAGACCGTATCACTGGCCTGGATGCTGGCGCCGACGATTACCTGGTCAAGCCTTTCGACCTCAACGA
ACTCAAGGCCCGCCTGCGCGCCTTGCTCAGGCGCAGCGCCGGGCGGGCCAAGGTGCTCATCGAGCACGCAGGCGTAAGCC
TTGACCCTGCCACTCAGCAGGTGCACTACAACGGTGTGCCCGTGGTACTGACGCCCAAGGAGTACCGGCTGCTGCACGAG
TTGCTGGCGCAACCGGGCAAGGTATTCACCCGTGAGCGGCTGACCCAACTGCTGTATGGCTGGGACGAGGAACCTGAGAG
CAACACGCTGGAAGTGAACATCTATCACTTGCGCAAGAAGCTGTTCAACGGCCTGATCCGCACGGTGCGCGGTATCGGTT
ACCTGGTCGAGGGCAAGGTATGA

Protein sequence : 
MRLLLVEDDTALGEGICDGLRQEGYTLDWLRDGLSGLHALQHEMFDLVILDLGLPRLGGIELLRRLRAGGDSLPVLILTA
RDATEDRITGLDAGADDYLVKPFDLNELKARLRALLRRSAGRAKVLIEHAGVSLDPATQQVHYNGVPVVLTPKEYRLLHE
LLAQPGKVFTRERLTQLLYGWDEEPESNTLEVNIYHLRKKLFNGLIRTVRGIGYLVEGKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-24 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-20 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-19 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-19 44
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 9e-17 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator AE015929.1.gene1106. Protein 4e-12 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator BAC0197 Protein 4e-23 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator BAC0308 Protein 5e-20 41
PputW619_3019 YP_001749880.1 two component transcriptional regulator U82965.2.orf14.gene. Protein 4e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_3019 YP_001749880.1 two component transcriptional regulator VFG0473 Protein 3e-28 48
PputW619_3019 YP_001749880.1 two component transcriptional regulator VFG0596 Protein 9e-21 43
PputW619_3019 YP_001749880.1 two component transcriptional regulator VFG1390 Protein 7e-23 41