Gene Information

Name : PputW619_2803 (PputW619_2803)
Accession : YP_001749664.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3104616 - 3105116 bp
Length : 501 bp
Strand : -
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2672 thiol peroxidase

DNA sequence :
ATGGCTCAAGTGACTCTCAAAGGCAACCCGGTTCAGGTCAACGGCGAGCTGCCAAAAGCCGGTGCCCAGGCTCCGGCCTT
TTCCTTGGTAGGTGAAGGTTTGGCCGACAAGTCGCTGAAGGACTTCGCCGGCAAGCGCAAGGTGCTGAACATCTTCCCAA
GTGTCGATACCCCGACCTGCGCTACCTCGGTGCGCAAGTTCAACGCCCAGGCCAACGATGTGGCCAACACCGTGGTGCTG
TGCATCTCCGCCGACCTGCCGTTCGCCCAGGCGCGCTTCTGCGGCGCCGAAGGCCTGGAGAACGTGAAGAACCTGTCGAC
CCTGCGTGGTCGCGAGTTCCTCGAAAACTACGGTGTTGCTATTGCCGACGGCCCGCTGGCCGGCCTGGCTGCCCGCGCCG
TGGTAGTGCTGGACGAAAACGACAAGGTGCTGCACAGCGAGCTGGTAGGCGAAATCGCTGACGAGCCGAACTATGACGCG
GCATTGGCGGTGTTGAAGTAA

Protein sequence :
MAQVTLKGNPVQVNGELPKAGAQAPAFSLVGEGLADKSLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVL
CISADLPFAQARFCGAEGLENVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDENDKVLHSELVGEIADEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-30 49
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-30 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-30 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-30 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_2803 YP_001749664.1 redoxin domain-containing protein VFG0087 Protein 8e-31 49