Gene Information

Name : PputW619_2510 (PputW619_2510)
Accession : YP_001749379.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2791599 - 2792132 bp
Length : 534 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: psp:PSPPH_0134 hypothetical protein

DNA sequence :

ATGGCGAAGAAGGAAAGTACCCAGCACAAACTCGACCGCGTTCGCGCGCCGCGGGTTCACATCACTTACGACGTGGACAT
CGGTGATGCGATCGAGAAAAAGGAGCTGCCCTTTGTCGTTGGCGTGCTGGGCGATTTTTCCGGCAACCCGCTGGAGCCCT
TGCCCAAGCTCAAGGACCGCAAGTTCGTCTTCATCGACCGCGACAACTTCAACGGCGTGCTCAAAGGCATCAAGCCGCGC
CTGACCTACCGCGTCGACAACACCCTGGCCAAAAACGGCACCCAGCTGGGCGTGGAGCTGAACTTCAACAGCATGGAAGA
CTTCGAGCCACAGAACGTGGTGAAGCAAGTCGAGCCACTGCGCAAGCTTTTGGAAGTGCGCAACAAGCTGGCCGACCTGC
GTAACAAGATGGGCGGCAACGACAAGCTCGAAGAGTTGCTGATGGACGTGCTGCAGAACACCGAGAAGCTGAAAACCCTG
GGCAAGGAATTCGGTCGCGAAGCCGCCGTACCCGCCGCCGATGGCAAAGAGTAA

Protein sequence :

MAKKESTQHKLDRVRAPRVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFVFIDRDNFNGVLKGIKPR
LTYRVDNTLAKNGTQLGVELNFNSMEDFEPQNVVKQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTL
GKEFGREAAVPAADGKE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	5e-31	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PputW619_2510	YP_001749379.1	type VI secretion protein	VFG2069	Protein	3e-31	43