Gene Information

Name : PputW619_0255 (PputW619_0255)
Accession : YP_001747130.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 267828 - 268571 bp
Length : 744 bp
Strand : +
Note : PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: pen:PSEEN5354 alginate biosynthesis regulatory protein

DNA sequence : 
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGCCCGTGAACGCTTGACGCGGTTATTCGCGGAACTGGAGGGGTACAC
CGTGCTGGAGCCCAGCGCCACCAACGGCGAGGAGGCCCTGGCCCTGATCGAAAGCCTCAAGCCTGATGTGGTCCTGCTGG
ATATCGGCATGCCGGGCCTTGACGGCCTGCAGGTCGCTGCCCGCTTGTGCGAGCGCGAAGCACCGCCGTCGGTGGTGTTC
TGCACCGGTGACGATGAATACGGCGCAGAGGCTTTCACGGACAGCACCCTCAGCCATGTAACCAAACCTATCCATCCCCA
TGCTCTGCGTGATGCCTTGCGCAAGGCTGAGAAACCCAGCCGTACGCAGCTGGCGGCGCTGACCCGGCCTGGCAGTGAAG
GGGGAGGGCCGCGCAGCCATATCAGCGCGCGTACGCGCAAGGGCATCGAACTGATCCCTTTGCCCCAGGTGATCTATTTC
ATCGCCGACCACAAATATGTGACGTTGCGCCATGAAGCAGGTGAAGTGCTGCTTGATGAGCCACTCAAGGCCCTGGAAGA
TGAATTCGGCGAACGCTTCGTGCGTATCCACCGCAACGCTCTGGTCGCCCGCGAGCGCATCGAGCGCTTGCAGCGCACGC
CGCTTGGGCATTTTCAACTGTTCCTCAAAGGCCTGGATGGTGATGCCTTGACTGTCAGCCGTCGGCATGTGGCTGGCGTA
CGCAAGATGATGCAGACGCTCTGA

Protein sequence : 
MNVLIVDDEPQARERLTRLFAELEGYTVLEPSATNGEEALALIESLKPDVVLLDIGMPGLDGLQVAARLCEREAPPSVVF
CTGDDEYGAEAFTDSTLSHVTKPIHPHALRDALRKAEKPSRTQLAALTRPGSEGGGPRSHISARTRKGIELIPLPQVIYF
IADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLFLKGLDGDALTVSRRHVAGV
RKMMQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-47 43
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_0255 YP_001747130.1 LytTR family two component transcriptional regulator VFG0119 Protein 2e-95 79