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Name : PputW619_2505 (PputW619_2505) Accession : YP_001749374.1 Strain : Pseudomonas putida W619 Genome accession: NC_010501 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2784125 - 2786722 bp Length : 2598 bp Strand : - Note : KEGG: psb:Psyr_4958 AAA ATPase, central region:Clp, N terminal:Clp, N terminal; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase DNA sequence : GTGAACCTGAAGTCTCTGTTCGCCAAGCTTAACGAAACCAGCCGCACGGCCACTGAAAGCGCGGCGGCCCTGTGCCTGTC GGAGCACCACTACGACGTCGAGGTGGAACACCTGCTGCTGCAGTTGCTGGACAACAGCGACAGTGACCTGCCGCTGATCC TGCGCCACTACGACGTGGTCGCCGAGCGCCTGCAGGCGCAACTGGTGACCGCCCTGGGTACCTTCAAGAAGGGCAACACC CGCACCCCGGCGCTGTCCCCGCACATCACCCGCATGATCGAGCAGGCATGGGTACTGGCCTCGATCGAGTATGGTGTGGG CCAGGTGCGCAGTGCGCACCTGTTGCAAGCATTGCTCGACGACGCCGAACTGCGCCGGGTGGTCATCGCCTCCGCACCGG AGCTTGAGAAGATCAACGCCGACGACCTGCGCCTGAACCTCAGCGCACTGGTCGAAGGCAGTGCCGAATCCCGGCTCGCC AGCCCTCTGGCCAGCCCCTCGGCGCCAGTGGCAGGCGCCGGCAAGGTTGGCGGCAAGACCCCGGCCCTGGACCAGTACAC CGTCAACCTCACACAAAGCGCCCGTGACGGCCGGATCGACCCGGTGCTTGGCCGCGAGTTCGAAGTGCGGCAGATGGTCG ACATCCTCACCCGTCGCCGCCAGAACAACCCGATCCTCACCGGCGAAGCCGGCGTCGGCAAGACCGCAGTGGTCGAAGGC CTGGCCTTGCGCATCGCCCAGGGCGATGTGCCAGCCCCACTCAAGGACGTCGCCGTGCACACCCTCGACCTGGGCCTGCT GCAGGCGGGTGCCGGGGTCAAGGGCGAGTTCGAAAACCGCCTCAAAGCGGTGATCGAAGAGGTCAAGCGCAGCCTGCACC CGATCATCCTGTTCATCGACGAAGCCCACACCCTGATCGGCTCCGGTGGCCAGGCCGGGCAGAACGATGCCGCGAACCTG CTCAAGCCAGCCCTGGCCCGTGGCGAGCTGCGCACCATCGCTGCCACCACCTGGGCCGAATACAAGAAGTACTTCGAAAA AGACGCCGCCCTCGCCCGTCGCTTCCAGGTAGTCAAGGTCGAAGAGCCTGACGAAGACAAGGCCATCCACATGCTGCGCG GCCTGCTCGGCAAGATGCGCGAGCACCACAAGGTGGCGGTGATGGACGAAGCACTGGTACAGGCCGTGCGCCTGTCCAAC CGCTACATCACCGGCCGCCAGCTGCCCGACAAGGCGGTCAGCGTGCTCGATACCGCCTGCGCACGCATCGCCTTGGCGCA GTCGTCGCAACCCGGCGCGCTGGAAGACTGCCGCCGCCATATCGACAACCTGCAGGCCGAAATCGCCGTGCTCGACCACG AAGCCGGCAAGGGCCACGACCATGCCCGGCGCCTTGCCGAGCTGCAGGCCGCCCTGCAGGCCGAGCAGTCGCACGAACAG CGCCTGAGCGCCCAGTGGCAGCAGGAGCTGGGCCTGGTCGAGCAACTCAAAGCCCTGGACAGCGCCAAGGACACCGACGC CGCCCAGCTCAACGCCCTGCGCGCCGAGCTGAGCGCCGTCCAGGGCGACCAGCCCCTGGTCCACGCCTTGGTCGATGCCG GCGCCATCGCCCAGGTGATCAGCGGCTGGACCGGTATCCCGCTGGGCAAGATGCTGCGTGACGAGATCGACACCGTGCAG CGCCTGCCTGCGCTGCTCGGTGAACGCGTGCTGGGCCAGGACCACGCGCTGCACGAAATCGGCAAGCGCATCAAGATTTC CCGCGCCCGCATGGAAGACCCAAACAAACCGATCGGCGTGTTCCTGCTGCTGGGCCCCAGCGGCGTCGGCAAGACCGAAA CCGCGCTGGCATTGGCCGACACCCTGTACGGCGGTGAGCGCAACCTGATCACCATCAACATGTCCGAGTACCAGGAGGCC CACACCGTATCGAGCCTCAAAGGCTCGCCACCCGGCTACGTCGGTTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGCG CCGCAAGCCCTACAGCGTGGTGCTGCTCGACGAGGTGGAGAAGGCCCACCCCGACGTGCTCGAGCTGTTCTTCCAGGTGT TCGACAAAGGCGTGCTGGACGACGGCGAAGGCCGCGAGATCAACTTCCGCAACACGGTGATCATCCTCACGTCCAACACC GGCACCGAGCGCATCATGCAGACCTGCCTGAATGCCCAGACGCTGCCTACCCCCGAGGCCATCGTCGAAGGCCTGCGCGA CGAGCTGAACCACGTCTTCAAACCGGCCTTCCTCGGCCGCCTGAGCATCGTGCCGTTCTACCCGGTGCAGGACCAGATCC TCGAGCGCATCGTTGCCCTCAAGCTCGAGCGTATCGCCAAACGTTTCGCCCGCAACCACCAGGCTGAGCTGAGCTACGAC GACGCCCTGGTCAAGGCCATCGCGGCACGTTGCACCGAGGTCGACAGCGGCGCACGCAACATCGACAACATCCTGTCCCG CACCCTGATGCCCGAGCTTGCCCAGCACGTTCTCGAGCGCATGGCCCAGGACGCGCCGATCGAGCGCTTGACGATCGAGC TGGGCAGCGATGGCGATTTCGCCTATCGCCTGGCCTGA Protein sequence : MNLKSLFAKLNETSRTATESAAALCLSEHHYDVEVEHLLLQLLDNSDSDLPLILRHYDVVAERLQAQLVTALGTFKKGNT RTPALSPHITRMIEQAWVLASIEYGVGQVRSAHLLQALLDDAELRRVVIASAPELEKINADDLRLNLSALVEGSAESRLA SPLASPSAPVAGAGKVGGKTPALDQYTVNLTQSARDGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG LALRIAQGDVPAPLKDVAVHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHTLIGSGGQAGQNDAANL LKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSN RYITGRQLPDKAVSVLDTACARIALAQSSQPGALEDCRRHIDNLQAEIAVLDHEAGKGHDHARRLAELQAALQAEQSHEQ RLSAQWQQELGLVEQLKALDSAKDTDAAQLNALRAELSAVQGDQPLVHALVDAGAIAQVISGWTGIPLGKMLRDEIDTVQ RLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEA HTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNT GTERIMQTCLNAQTLPTPEAIVEGLRDELNHVFKPAFLGRLSIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYD DALVKAIAARCTEVDSGARNIDNILSRTLMPELAQHVLERMAQDAPIERLTIELGSDGDFAYRLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-169 | 48 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputW619_2505 | YP_001749374.1 | type VI secretion ATPase | VFG2076 | Protein | 0.0 | 51 |
| PputW619_2505 | YP_001749374.1 | type VI secretion ATPase | VFG2084 | Protein | 1e-152 | 46 |
| PputW619_2505 | YP_001749374.1 | type VI secretion ATPase | VFG0079 | Protein | 5e-109 | 41 |
