Gene Information

Name : PputW619_2409 (PputW619_2409)
Accession : YP_001749278.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2679052 - 2679732 bp
Length : 681 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2089 DNA-binding response regulator

DNA sequence : 
ATGCCACGCGTACTGACCATCGAAGACGACGCCGTCACCGGCCAGGAAATCGTCGCCGAACTCACCAGCCACGGTCTGGA
AGTGGATTGGGCAGATAATGGCCGTGAAGGCCTGGCCAAGGCCATCGGCGGCGGCTACGACCTGATCACCCTGGACCGCA
TGCTGCCTGAGGTCGATGGCCTGACCATCGTCACCACCCTGCGCAACCTGAAAATCGCAACGCCCATCCTGATGATCAGC
GCACTGTCCGACGTCGATGAGCGTGTACGAGGCCTGCGTGCCGGTGGCGACGACTACCTGACCAAACCGTTCGCCTCCGA
CGAGATGGCCGCCCGGGTGGAAGTGCTGTTGCGGCGCAACAGCGTGCCGATGACCCAGACCCGGCTGCAGGTCGCCGACT
TGCAACTGGACCTGATCAGCCATGAGGCCCGCCGCGGCGACCAGACGCTCAACCTGCTGCCCACCGAGTACAAATTGCTG
GAGTACCTGATGCGCCACAGCGGCCAGGTAATCACGCGGATGATGATCTTCGAGGAAGTCTGGGGCTACCACTTCGACCC
TGGCACCAACCTGATCGATGTGCATATCGGCCGGCTGCGCAAGAAGATCGATTCCCCCGGGCAATCGCCGCTGATCCGTA
CCGTACGGGGCTCCGGCTATGCCATTGCTGAACCCGTCTAA

Protein sequence : 
MPRVLTIEDDAVTGQEIVAELTSHGLEVDWADNGREGLAKAIGGGYDLITLDRMLPEVDGLTIVTTLRNLKIATPILMIS
ALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRNSVPMTQTRLQVADLQLDLISHEARRGDQTLNLLPTEYKLL
EYLMRHSGQVITRMMIFEEVWGYHFDPGTNLIDVHIGRLRKKIDSPGQSPLIRTVRGSGYAIAEPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-33 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_2409 YP_001749278.1 two component transcriptional regulator BAC0111 Protein 5e-46 46
PputW619_2409 YP_001749278.1 two component transcriptional regulator BAC0347 Protein 2e-41 44
PputW619_2409 YP_001749278.1 two component transcriptional regulator BAC0125 Protein 2e-40 44
PputW619_2409 YP_001749278.1 two component transcriptional regulator BAC0197 Protein 5e-38 43
PputW619_2409 YP_001749278.1 two component transcriptional regulator BAC0308 Protein 7e-39 42
PputW619_2409 YP_001749278.1 two component transcriptional regulator BAC0083 Protein 9e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_2409 YP_001749278.1 two component transcriptional regulator VFG0596 Protein 7e-34 41
PputW619_2409 YP_001749278.1 two component transcriptional regulator VFG1389 Protein 3e-32 41