Gene Information

Name : PputW619_2321 (PputW619_2321)
Accession : YP_001749190.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : transposase Tn3 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4644
EC number : -
Position : 2597880 - 2600846 bp
Length : 2967 bp
Strand : -
Note : PFAM: transposase Tn3 family protein; KEGG: pap:PSPA7_5337 transposase

DNA sequence :
ATGCCGCGTCGCTTGATCCTCTCGGCCACGGAGCGGGGCACCCTGCTCGCGTTGCCAGAAAGCCAGGATGACCTGATCCG
CTACTACACCTTCAACGACTCCGACCTGTCGCTGATCCGTCAGCGGCGCGGCGACGCCAACCGCCTCGGCTTCGCCGTGC
AACTCTGCCTGCTGCGCTACCCCGGCTATGCGTTGGGCACTGACAGCGAGCTGCCCGAACCGGTCATCCTGTGGGTGGCC
AAGCAAGTCCAGACCGATCCGGCGAGTTGGACGAAGTACGGCGAGCGCGATGTGACCCGTCGCGAGCACGCCCAGGAACT
GCGCACCTACCTTCAACTGGCCCCGTTCGGCCTGTCCGACTTCCGCGCCCTGGTGCGCGAGCTGACCGAACTGGCCCAGC
AGACCGACAAGGGCTTGCTGCTGGCCGGCCAGGCGCTGGAGAGCCTGCGGCAGAAGCGACGCATCCTGCCGGCGTTGAGC
GTGATCGACCGGGCTTGCTCGGAGGCCATTGCACGGGCCAATCGGCGGGTCTACCGCGCCCTGGTTGAACCGCTCACGGA
CTCGCATCGGGCCAAGCTGGACGAGCTGTTGAAGCTCAAGGCCGGCAGCAGCATCACCTGGTTGACCTGGCTGCGCCAGG
CACCGCTGAAACCCAACTCTCGGCACATGCTTGAGCACATCGAGCGGCTGAAGACATTTCAGCTGGTGGACTTGCCCGAA
GTCCTGGGCCGGCACATCCACCAGAACCGCCTGCTCAAGCTGGCCCGCGAGGGTGGGCAGATGACGCCCAAAGACCTCGG
CAAGTTCGAGCCGCAGCGGCGCTATGCGACCCTGGCCGCCGTGGTGCTGGAGAGCACTGCAACCGTGATTGATGAGCTGG
TGGATCTGCACGACCGCATCCTAGTCAAGCTGTTCAGCGGCGCGAAGCACAAGCATCAGCAGCAGTTCCAGAAGCAGGGC
AAGGCGATCAACGACAAGGTGCGCCTGTACTCCAAGATCGGCCAGGCGCTGCTGGAGGCCAAGGAAGCCGGCAGCGACCC
CTATGCCGCCATCGAGGCGGTGATCCCCTGGGACGAGTTCACCGAGAGCGTCAGCGAAGCCGAGCTGCTGGCCCGGCCGG
AGGGCTTCGACCACCTGCACCTGGTCGGCGAGAACTTCGCCACCCTGCGCCGCTACACGCCGGCTCTGCTGGAGGTATTG
GAGCTGCGCGCCGCCCCGGCCGCGCAGGGCGTGCTGGCAGCCGTGCAGACGCTGCGCGAGATGAACGCCGACAACCTGCG
CAAGGTGCCGGCCGATGCTCCCACCGCCTTCATCAAGCCGCGCTGGAAGCCACTGGTGATCACCCCGGAAGGCCTCGACC
GGCGCTTCTACGAAATCTGCGCCCTGTCCGAGCTGAAGAACGCCCTGCGCTCCGGCGACATCTGGGTCAAGGGCTCGCGG
CAGTTCCGCGACTTCGACGACTACCTGTTGCCGGCCGAGAAGTTCGCCGCGCTCAAGCGGGAACAGGCCCTGCCGCTGGC
GATCAACCCGAACAGCGACCAGTATCTGGAAGAGCGCTTGCAGCTGCTGGACGAGCAGTTGGCCACTGTCGCCCGCCTGG
CCAAGGACAACGAGCTGCCCGATGCCATCCTCACCGAGTCCGGGTTGAAGATCACCCCGCTGGATGCGGCGGTGCCGGAT
CGGGCGCAGGCGCTGATCGACCAGACCAGTCAGTTACTGCCGCGCATCAAGATCACCGAACTGCTGATGGACGTGGACGA
CTGGACGGGCTTCAGCCGCCACTTCACCCACCTGAAGGACGGGGCCGAGGCCAAAGACCGGACGTTGCTGCTGTCCGCGA
TCCTCGGTGATGCGATCAACCTCGGGCTGACCAAGATGGCCGAGTCGAGCCCCGGTCTGACCTACGCCAAGCTGTCCTGG
CTGCAAGCCTGGCACATCCGCGACGAGACCTATTCGGCGGCCCTGGCCGAGCTGGTCAACCACCAGTACCAGCATGCCTT
CGCCGCCCACTGGGGCGACGGCACCACCTCATCCTCCGATGGCCAGCGTTTCCGGGCTGGCGGCCGGGGCGAGAGCACCG
GACACGTCAACCCGAAGTACGGCAGTGAGCCGGGACGGCTGTTCTACACCCATATCTCCGACCAGTACGCGCCGTTCAGC
ACCCGCGTGGTGAATGTCGGCGTGCGCGATTCCACCTATGTGCTCGACGGCCTGCTGTACCACGAGTCCGACCTGCGGAT
CGAGGAGCACTACACCGACACGGCCGGCTTCACCGATCACGTCTTCGCCCTGATGCACCTGCTGGGCTTCCGTTTCGCGC
CGCGCATCCGCGACCTCGGCGAAACCAAGCTGTACGTGCCGCAGGGCGTGCAGACCTACCCGACGCTGCGGCCGCTGATC
GGCGGCACCCTGAACATCAAGCACGTCCGCGCCCATTGGGACGACATCCTGCGCCTGGCCAGCTCGATCAAACAGGGCAC
CGTCACTGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGCCAGAACGGCCTGGCCGTGGCCCTGCGCGAGCTGG
GCCGGATCGAACGCACGCTGTTCATCCTAGACTGGCTGCAAAGTGTTGAGCTGCGCCGCCGCGTGCATGCCGGCCTGAAC
AAAGGTGAGGCGCGCAACTCGCTGGCCAGGGCGGTGTTCTTCAACCGCCTTGGGGAAATCAGGGATCGGAGCTTCGAGCA
GCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCGGCTATCGTGCTGTGGAACACGGTGTACCTGGAGCGCGCCA
CCCAGGGGTTGGTCGAGGCCGGCAAGCCGGTGGACGGCGAGCTGCTGCAATTCCTGTCGCCGCTGGGCTGGGAGCACATC
AACCTCACCGGCGATTACGTCTGGCGGCAGAGCCGCAGACTGGAAGACGGGAAGTTTCGGCCCCTACGGATGCCCGGAAA
ACCTTAG

Protein sequence :
MPRRLILSATERGTLLALPESQDDLIRYYTFNDSDLSLIRQRRGDANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVA
KQVQTDPASWTKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS
VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKPNSRHMLEHIERLKTFQLVDLPE
VLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYATLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQG
KAINDKVRLYSKIGQALLEAKEAGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRYTPALLEVL
ELRAAPAAQGVLAAVQTLREMNADNLRKVPADAPTAFIKPRWKPLVITPEGLDRRFYEICALSELKNALRSGDIWVKGSR
QFRDFDDYLLPAEKFAALKREQALPLAINPNSDQYLEERLQLLDEQLATVARLAKDNELPDAILTESGLKITPLDAAVPD
RAQALIDQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLTKMAESSPGLTYAKLSW
LQAWHIRDETYSAALAELVNHQYQHAFAAHWGDGTTSSSDGQRFRAGGRGESTGHVNPKYGSEPGRLFYTHISDQYAPFS
TRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPQGVQTYPTLRPLI
GGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLN
KGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFLSPLGWEHI
NLTGDYVWRQSRRLEDGKFRPLRMPGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 97
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 97
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 74
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 73
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_2321 YP_001749190.1 transposase Tn3 family protein VFG1031 Protein 0.0 72