Gene Information

Name : rph (PputW619_0179)
Accession : YP_001747054.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 184470 - 185192 bp
Length : 723 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAAACGTCCAAGTGGTCGCGCCGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAAGG
GTCGGTACTGGTCGAGTTCGGTGACACCAAGGTCATCTGCACGGTCAGCGTTGAAAACGGTGTGCCGCGCTTCCTCAAAG
GCCAGGGCCAAGGCTGGCTGACCGCCGAGTACGGCATGCTGCCGCGCTCCACCGGTGAGCGTAACCAGCGTGAAGCCAGC
CGTGGCAAGCAGGGTGGTCGCACCCTGGAAATCCAGCGCCTGATCGGCCGCTCGCTGCGCGCCGCGCTGGACATGAGCAA
GCTGGGTGACATCACTTTGTACGTCGACTGCGATGTGATCCAGGCCGATGGCGGCACCCGCACCGCGTCGATCACCGGCG
CCATGGTCGCCTTGGTCGATGCCTTGGCAGTGATCAAGAAACGTGGTGGCCTGAAGGCCGGCAATCCGCTCAAGCACATG
ATCGCCGCCGTGTCGGTGGGTATGTACCAGGGCGAAGCCGTACTCGACCTGGACTATCTGGAAGACTCCGCTGCAGAGAC
CGACCTGAACGTGGTCATGACCAGTGCCGGTGGTTTCATCGAAGTGCAGGGCACTGCAGAGGGTGCACCGTTCCAGCCCG
AAGACTTCAACGCCATGCTGGCGCTGGCGCAAAAGGGCATGAACGAGATCTTCGAACTGCAGCAGGTCGCTCTGGCCGAC
TGA

Protein sequence :
MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALVDALAVIKKRGGLKAGNPLKHM
IAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFELQQVALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-65 59