Gene Information

Name : PputW619_1672 (PputW619_1672)
Accession : YP_001748546.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1860665 - 1861363 bp
Length : 699 bp
Strand : +
Note : KEGG: pen:PSEEN3707 lipoprotein releasing system, ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGTGAGTCGCGCATGAGTGATAAAGCCGTTCTGAGTTGCCGCAACCTGGGCAAGTCCTACGACGAGGGGCCGGAGTC
GGTGCAAGTGCTGGCCGGGCTCAACCTCGAACTGCACGCAGGGGAGCGGGTGGCCATCGTCGGCAGTTCCGGTTCGGGCA
AGAGCACCTTGCTCAACCTGCTGGGCGGCCTCGATCGGCCGACCCAAGGCAGCGTCTGGCTGGCCGGCGAAGAGCTGTCG
GCGCTTGGCGAGCGGGCCCGCGGCCTGCTGCGCAACCGCGAGCTGGGCTTTGTCTACCAGTTCCACCACCTGCTGCCCGA
GTTCACCGCCATGGAGAACGTGTGCATGCCGCTGCTGATCGGCCGCACCGCGATCCCCGAGGCACGTGAGCGCGCCGAGG
CACTGCTCAAGCGTGTCGGCCTGGGCCACCGCCTGCACCACAAGCCGGCCGAGCTGTCCGGTGGTGAGCGTCAGCGGGTG
GCCATTGCCCGGGCGCTGGTCAACCGGCCGGGCCTGGTGATGCTCGATGAGCCGACCGGCAACCTCGACCACCACACCGC
CCAAGGCATCCAGGAATTGATGCAGGAGCTGTCCAGCGCCTCGCGCACGGCATTCCTGGTGGTGACCCACGACCTCAACC
TGGCGCGCCAGATGGATCGCGTGCTGAAACTCGACGACGGTCATCTGGTGGCAATCTGA

Protein sequence : 
MSESRMSDKAVLSCRNLGKSYDEGPESVQVLAGLNLELHAGERVAIVGSSGSGKSTLLNLLGGLDRPTQGSVWLAGEELS
ALGERARGLLRNRELGFVYQFHHLLPEFTAMENVCMPLLIGRTAIPEARERAEALLKRVGLGHRLHHKPAELSGGERQRV
AIARALVNRPGLVMLDEPTGNLDHHTAQGIQELMQELSSASRTAFLVVTHDLNLARQMDRVLKLDDGHLVAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_1672 YP_001748546.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 8e-36 46
PputW619_1672 YP_001748546.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 4e-39 45