Gene Information

Name : PputW619_1193 (PputW619_1193)
Accession : YP_001748067.1
Strain : Pseudomonas putida W619
Genome accession: NC_010501
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1325922 - 1326620 bp
Length : 699 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1339 DNA-binding response regulator

DNA sequence : 
ATGGACCAACCCGTACCCCGCATCCTGATCGTCGAAGACGACCAGCGCCTCGCCGAGCTTACGGCTGAATACTTGCAGGC
CAACGGTTTCGATGTGGCAGTGGAGGGCGATGGTGCGCGCGCCGCCCGGCGTATCGTCGACAGCCAGCCAGACATGGTCA
TCCTCGACCTGATGCTGCCCGGTGAAGACGGCCTGAGCATCTGCCGCCGCGTACGTGGCCAGTACGCAGGGCCCATCCTC
ATGCTCACTGCCCGCAGCGACGAGCTCGACCAGGTCCAGGGCCTGGACCTTGGCGCTGACGATTACGTGTGCAAGCCGGT
GCGCCCACGCTTGCTGTTGGCACGCATCCAGGCCCTGCTGCGGCGCAGCGAGCCGGCACAAGGCAAAACCCAAGAGCTGG
CCTTTGGTGCCCTGAGCATCGACAACCGCCTGCGCGAAGCCCGGCTCGGCGAACAGCTGATCGAACTTACCGGTGCCGAG
TTCGACCTGCTCTGGCTGCTGGCCAGCAACGCCGGGCGGGTACTGTCGCGTGAGCAGATCTTCACCGCCTTGCGCGGTGT
CGGTTACGACGGTCAGGACCGCTCCATCGACGTGCGCATCTCCAAGATCCGCCCCAAGATCGGCGACGATCCGATCCACC
CCCGTCTTATCAAGACCCTGCGCAGCAAAGGCTACCTGTTCGTCGGCGATGCACCATGA

Protein sequence : 
MDQPVPRILIVEDDQRLAELTAEYLQANGFDVAVEGDGARAARRIVDSQPDMVILDLMLPGEDGLSICRRVRGQYAGPIL
MLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRRSEPAQGKTQELAFGALSIDNRLREARLGEQLIELTGAE
FDLLWLLASNAGRVLSREQIFTALRGVGYDGQDRSIDVRISKIRPKIGDDPIHPRLIKTLRSKGYLFVGDAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-27 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_011595.7057856.p0 Protein 3e-29 43
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_010410.6002989.p0 Protein 3e-29 43
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_010400.5986590.p0 Protein 3e-29 43
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_012469.1.7685629. Protein 1e-30 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_002951.3237708.p0 Protein 3e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_002758.1121668.p0 Protein 3e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_009641.5332272.p0 Protein 3e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_013450.8614421.p0 Protein 3e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_007793.3914279.p0 Protein 3e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_003923.1003749.p0 Protein 4e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_002745.1124361.p0 Protein 3e-34 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator NC_009782.5559369.p0 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputW619_1193 YP_001748067.1 two component transcriptional regulator VFG1702 Protein 1e-27 41
PputW619_1193 YP_001748067.1 two component transcriptional regulator VFG1563 Protein 1e-27 41