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Name : araD (EcSMS35_0063) Accession : YP_001742180.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 71003 - 71698 bp Length : 696 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAAGATCTCAAACGCCAGATATTAGAAGCCAACCTGGCGCTGCCAAAACATAACCTGGTCACGCTCACATGGGG CAACGTCAGCGCCGTTGATCGCGAGCGCGGCGTCCTGGTGATCAAACCTTCCGGCGTCGATTACAACGTCATGACCGCTG ACGATATGGTCGTGGTCAGCATCGAAACCGGTGAAGTGGTTGAAGGAACGAAAAAGCCCTCCTCCGACACGCCAACTCAC CGGCTGCTCTATCAGGCATTTCCGTCCATTGGCGGCATTGTGCACACACACTCGCGCCACGCCACCATCTGGGCGCAGGC GGGTCAGTCGATTCCAGCAACCGGTACCACCCACGCCGACTATTTCTACGGCACCATTCCCTGCACCCGAAAAATGACCG ACGCAGAAATCAACGGTGAATATGAGTGGGAAACCGGTAACGTCATCGTAGAAACCTTCGAAAAACAGGGTATCGATGCG GCGCAAATGCCCGGCGTCCTGGTCCATTCTCACGGCCCATTTGCATGGGGCAAAAATGCCGAAGATGCAGTGCATAACGC CATCGTGCTGGAAGAGGTCGCTTATATGGGGATATTCTGCCGTCAGTTAGCGCCGCAGTTACCGGATATGCAGCAAACGC TGCTGGATAAACACTATCTGCGTAAGCATGGTGCGAAGGCATATTACGGGCAGTAA Protein sequence : MLEDLKRQILEANLALPKHNLVTLTWGNVSAVDRERGVLVIKPSGVDYNVMTADDMVVVSIETGEVVEGTKKPSSDTPTH RLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 4e-61 | 57 |
