Gene Information

Name : EcSMS35_4888 (EcSMS35_4888)
Accession : YP_001746799.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1479
EC number : -
Position : 5005139 - 5007232 bp
Length : 2094 bp
Strand : +
Note : identified by similarity to GB:CAH55816.1; match to protein family HMM PF03235; match to protein family HMM PF07510

DNA sequence :
ATGAAAGCTACAGAAGCCCGCCTACTCGATTTTTTAAAACGTTCGCAGCAGTTTGTGATTCCCATTTATCAACGGACTTA
TTCATGGACAGAACAACAATGTCGGCAACTTTGGGACGACATCATTCGTGCCGGAAAGCGTGACGATATATCAGCGCATT
TTATCGGTTCGGTTGTTTATATTGAGCAGGGGTTGTATCAGGTTTCTGGTATTTCTCCGTTACTGGTCATTGATGGTCAA
CAAAGGCTGACGACCGCAATGTTGCTGATTGAGGCTTTATCGCGTCATCTTGGCGAAGACGAAGTTTTTGATGGCTTTTC
AGCAATGAAATTGCGTAATTATTATTTACTCAATCCTTATGAGTCCGGCGAGAAAGGATTTAAATTACTGCTGACCGAGA
CTGATAAAGACAGTTTGCTGGCGTTAATAAAACAAAGACCAATGCCAGAAAACTATTCCCATCGAATAATGGAAAACTTT
ACTTTCTTTGATGAGCAAATTGCCAAACTCGGTGATGACTTGATCCCCTTATGTCGTGGGTTAGCAAAATTATTAATTGT
CGATGTGGCGCTTAATCGTGGTCAGGATAATCCGCAACTGATTTTTGAAAGTATGAACTCTACCGGTAAGGCGTTAAGTC
AGGCCGATCTGGTGCGCAATTTTATTCTGATGGGTCTCGAACCAGAGCATCAAACCCGGTTGTATGAAGATCACTGGCGT
CCAATGGAAGTCGCTTTTGGTCAGCAAGGTTACAGCGAATATTTTGACAGCTTTATGCGTCATTATCTGACGGTAAAAAC
GGGGGAGATCCCTCGTACAGATGAAGTCTATGAGGCATTTAAACTCCATGCCCGCAGCCAGAGTGTTGCTGAAAAAGGCG
TGGATCACCTGGTTGAAGATATTCACATCTACGCGGAGTATTACTGTGCAATGGCATTGGGTAAAGAAAGTGACAAATCG
CTTGCTACGGCTTTTCAGGATTTGCGCGAGTTAAAGGTCGATGTGGCGTATCCTTTCTTACTGGCGCTTTATCATGACTA
TAAAAATGGCGATTTGCCTCACGAAGATTTCCTGAGCATAATTCGTTTAATTGAATCTTATGTTTTCCGCCGTGCAGTAT
GTGCGATTCCGACAAATTCTCTTAACAAGACGTTTGCTACCTTTTATAAGGTCATTATTAAAGAAAAATATCTGGAAAGT
ATTCAGGTACATTTTCTGAATCTGCCTTCATATCGTCGTTTCCCCAACGATGATGAATTTAAACGGGAATTAAAAGTTCG
CGATCTCTATAACTTCCGCAGTCGCAGCTACTGGTTACGACGACTGGAAAACGATAAACGCAGAGAGCGCGTGGAAGAGT
TTACGATTGAGCATATTATGCCGCAGAACGAAAATTTGTCGGCTAAATGGCGTGAAGAGCTGGGAAGCGACTGGCAGCGT
GTGCATAAAGAACTGTTACATACGTTGGGGAATCTCACATTAACGCGCTATAACTCCCGCTACAGTGACAGACCTTTCGC
GGAAAAACGCGATATTGAAGACGGCTTTAAGCATAGCCCGCTTTATTTGAATATCGGTCTTGGACAGTGCGAAAAATGGG
ATGAAGCCGCCATTCGCGCCCGTGCCGATCGTCTGGCCGATCTCGCGGTTCAGGTCTGGCAAGCGCCTGCTCTTCCTGAA
GAGGTTTTAGCTGTTTATCGGGCGCAGCCTGAAAACAAAACCAGTTATAGCCTGAGTGATTATCCTTTTCTTGCTGATGG
TTCGCATAGCCGGGTGTTATTTGATCATCTTCGCGATGAAGTTATGCGCCTGGACGCAGGGATCACGCAGGAAGTATTGA
AGCTCTATATTGCGTTTAAAGCGGAAACGAATTTTGTTGATGTTGTGCCGCAAAAAAGCCGACTGCGATTGTCGCTTAAT
ATGCAGTTTCATGAACTGGTCGATCCGAAAGGTATTGCCAAAGATGTGACAAATGTTGGGCGCTGGGGCAATGGTGATGT
GGAAATTGGTTTCAGCGACCTCGCACAACTTCCTTACGTTATGGGATTAATTCGTCAGGCATTTGAAAAACAGATGGAGA
GCGCGTTGGTCTAA

Protein sequence :
MKATEARLLDFLKRSQQFVIPIYQRTYSWTEQQCRQLWDDIIRAGKRDDISAHFIGSVVYIEQGLYQVSGISPLLVIDGQ
QRLTTAMLLIEALSRHLGEDEVFDGFSAMKLRNYYLLNPYESGEKGFKLLLTETDKDSLLALIKQRPMPENYSHRIMENF
TFFDEQIAKLGDDLIPLCRGLAKLLIVDVALNRGQDNPQLIFESMNSTGKALSQADLVRNFILMGLEPEHQTRLYEDHWR
PMEVAFGQQGYSEYFDSFMRHYLTVKTGEIPRTDEVYEAFKLHARSQSVAEKGVDHLVEDIHIYAEYYCAMALGKESDKS
LATAFQDLRELKVDVAYPFLLALYHDYKNGDLPHEDFLSIIRLIESYVFRRAVCAIPTNSLNKTFATFYKVIIKEKYLES
IQVHFLNLPSYRRFPNDDEFKRELKVRDLYNFRSRSYWLRRLENDKRRERVEEFTIEHIMPQNENLSAKWREELGSDWQR
VHKELLHTLGNLTLTRYNSRYSDRPFAEKRDIEDGFKHSPLYLNIGLGQCEKWDEAAIRARADRLADLAVQVWQAPALPE
EVLAVYRAQPENKTSYSLSDYPFLADGSHSRVLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLN
MQFHELVDPKGIAKDVTNVGRWGNGDVEIGFSDLAQLPYVMGLIRQAFEKQMESALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_729 YP_003728750.1 hypothetical protein Not tested cag PAI Protein 2e-149 48