Gene Information

Name : EcSMS35_4803 (EcSMS35_4803)
Accession : YP_001746717.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4891734 - 4892219 bp
Length : 486 bp
Strand : +
Note : identified by match to protein family HMM PF03230

DNA sequence :
ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTAACTACTGCATCAGGGAATAACCAGTCTCAACTGGT
TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGTGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAATAAC
GGCGGCGCATTTATGGCGCCCGAACCGGATGAAGATGATGGAGAAACCTGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTT
ATGCCATGACGGTCCATTATTATCGGTTGCGGGATTACGCCCTGCAACATCCGGAATGCAACGCCATTATGCGCATCATT
GACTGA

Protein sequence :
MTTSSHNSTTPSVSVTTASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN
GGAFMAPEPDEDDGETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECNAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 4e-64 98
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-64 98
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 3e-59 97
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 1e-63 97
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 8e-59 97
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 3e-59 97
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 6e-57 97
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 1e-57 96
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 5e-57 96
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-57 95
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-57 95
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-57 95
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-62 95
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 1e-63 95
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 8e-57 94
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 8e-57 94
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 1e-61 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_4803 YP_001746717.1 antirestriction protein VFG1677 Protein 2e-64 98
EcSMS35_4803 YP_001746717.1 antirestriction protein VFG1527 Protein 8e-65 98
EcSMS35_4803 YP_001746717.1 antirestriction protein VFG1616 Protein 6e-64 97
EcSMS35_4803 YP_001746717.1 antirestriction protein VFG0659 Protein 2e-57 94