Gene Information

Name : EcSMS35_4800 (EcSMS35_4800)
Accession : YP_001746714.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4889713 - 4890495 bp
Length : 783 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence : 
ATGTTGAACAGAAAACTAAATATACGGCTACGTCATTCCCTGAACAGTCACTGCATACCTTCCATCATTATCAATAACAC
CGTACGTTCATTTCAGAGGTCAGTCATGAATACCAGAGCTCTTTTTCCCCTGCTGTTCACTGTGGCATCATTCTCCGCCT
CCGCCGGCAACTGGGCTGTCAAAAACGGCTGGTGTCAGACCATGACGGAAGATGGTCAGGCGCTGGTAATGCTGAAAAAT
GGCACGATTGGTATTACCGGCCTGATGCAGGGATGCCCGAATGGTGTACAGACGCTCCTGGGCAGCCGTATCAGTATTAA
CGGTAACCTGATCCCCACATCACAAATGTGTAATCAGCAGACGGGATTCAGGGCTGTTGAGGTGGAAATCGGACAGGCGC
CGGAAATGGTCAAAAAAGCCGTTCACTCCATAGCAGAGCGTGATGTGTCCGTTTTACAGGCATTTGGTGTACGAATGGAA
TTCACCCGCGGTGATATGCTGAAGGTCTGTCCGAAATTTGTCACATCACTTGCCGGTTTTTCCCCGAAACAGACGACCAC
TATTAATAAAGATTCCGTCCTGCAGGCTGCCCGGCAGGCATACGCCCGGGAATATGACGAGGAAACAACAGAAACCGCTG
ATTTTGGCTCTTACGAAGTAAAAGGCAATAAGGTTGAGTTTGAAGTATTCAATCCTGAAGACCGTGCGTACGACAAAGTG
ACCGTCACGGTTGGTGCTGACGGTAATGCCACCGGCGCCAGCGTTGAATTTATCGGAAAATAG

Protein sequence : 
MLNRKLNIRLRHSLNSHCIPSIIINNTVRSFQRSVMNTRALFPLLFTVASFSASAGNWAVKNGWCQTMTEDGQALVMLKN
GTIGITGLMQGCPNGVQTLLGSRISINGNLIPTSQMCNQQTGFRAVEVEIGQAPEMVKKAVHSIAERDVSVLQAFGVRME
FTRGDMLKVCPKFVTSLAGFSPKQTTTINKDSVLQAARQAYAREYDEETTETADFGSYEVKGNKVEFEVFNPEDRAYDKV
TVTVGADGNATGASVEFIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42095.1 hypothetical protein Not tested PAI II 536 Protein 2e-120 100
unnamed CAD33783.1 hypothetical protein Not tested PAI I 536 Protein 6e-120 99
ORF_45 AAZ04454.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-120 99
c5158 NP_757006.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-120 99
APECO1_3491 YP_854320.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-120 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_4800 YP_001746714.1 hypothetical protein VFG1614 Protein 1e-120 100
EcSMS35_4800 YP_001746714.1 hypothetical protein VFG1524 Protein 4e-120 99