Gene Information

Name : EcSMS35_4793 (EcSMS35_4793)
Accession : YP_001746707.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4884378 - 4885109 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAACCAATACACAATGCTTACTGGTTATCCCGTTTTGAAAGTATTCTCAACGGTGCCCTGGCGCAACACCGTGC
CGTCTCGTTAATCCGGGTGGATTTACGTTTCCCTGAGTATATGCCTGCCACCATCATGGATACCGATTTAGATTCAGCGG
TGATTTCTCGTTTTTTTGCATCCCTGAAAGCAAAAATTCAGGCTTACCAGCGGAAAAAACGACGTGCCAACAAGCGTGTG
CGTGCAACCACTCTGCGTTATTTCTGGTGTCGGGAGTTTGGCAAGGAAAAAGGCAGGAAACATTATCACGTGATATTACT
GCTCAACAAAGATACCTGGTGCTCGCCAGGGGATTTCACCGTTCCTTCTTCGCTGGCGACGCTGATCCAACTGGCATGGT
GCAGTGCTCTGCATCTTGAGCCCTGGCAGGGTAATGGACTGGTTCATTTTTCCAGGCGGACGCCTTTCCGTAAACCGACA
TCATCTGATGCTCGCCCTTCTTCCGATGATACGCCTGTGCCTGGTGGATGTTCTGATACCCGGAAGGATTCTGACAAAAA
ATCTGGTGGATCCGCTGTTCTCTGGGTCAAGCGTGGTGATGTGGAAGCGATGCAGAAAGCCATGGAGAGAGCCCGTTATC
TCGTGAAGTATGAGACGAAGCAGCATGACGGTTCTGGTCAACGTAATTATGGTTGCAGTCGTGGGCTGGGGCGTCTACTG
GATGGCAGGTGA

Protein sequence :
MNQPIHNAYWLSRFESILNGALAQHRAVSLIRVDLRFPEYMPATIMDTDLDSAVISRFFASLKAKIQAYQRKKRRANKRV
RATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATLIQLAWCSALHLEPWQGNGLVHFSRRTPFRKPT
SSDARPSSDDTPVPGGCSDTRKDSDKKSGGSAVLWVKRGDVEAMQKAMERARYLVKYETKQHDGSGQRNYGCSRGLGRLL
DGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 3e-102 94
unnamed AAL67401.1 intergenic-region protein Not tested PAI II CFT073 Protein 8e-91 84
ORF_40 AAZ04449.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-91 84
APECO1_3496 YP_854315.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-90 84
c5172 NP_757020.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-90 84
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 7e-30 41
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-30 41
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_4793 YP_001746707.1 hypothetical protein VFG1610 Protein 2e-102 94