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Name : EcSMS35_4791 (EcSMS35_4791) Accession : YP_001746705.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : IS1203 transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4882937 - 4883827 bp Length : 891 bp Strand : + Note : identified by match to protein family HMM PF00665 DNA sequence : ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAAC GTATTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAG AGATACAGCGCGTATACGATGAAAATCATCAGGTGTACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATC AGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTAC GACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGG TGGCTGATTTTACTTACGTCAGCACATGGCGGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATC GTGGGGTGGCGGGTCTCATCGTCTATGGAAACGACATTCGTGCTGGATGCTCTGGAGCAGGCGTTATGGGCCCGTCAACC GTCCGGCACAGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGAT TACTGGCATCAACAGGAAGTACTGGTGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGCCTTTACAAAGCGGAG GTAATACACCGTAAGAGCTGGAAAAACCGGACAGAAGTGGAGCTGGCCACACTCACGTGGGTGGACTGGTATAACAATCG ACGATTGCTGGAAAGGCTGGGCCATATCCCACCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATC TGGCAGCCTGA Protein sequence : MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHQVYGVRKVWRQLLREGI RVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYI VGWRVSSSMETTFVLDALEQALWARQPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAE VIHRKSWKNRTEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-134 | 99 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 1e-135 | 99 |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 2e-93 | 99 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 2e-108 | 99 |
| c5167 | NP_757015.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-101 | 99 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 9e-135 | 97 |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 3e-92 | 97 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-134 | 97 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-134 | 97 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 2e-130 | 96 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 1e-130 | 96 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 4e-129 | 96 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 6e-131 | 96 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 3e-130 | 96 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 3e-130 | 96 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 3e-130 | 96 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 1e-132 | 95 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 2e-130 | 95 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 2e-130 | 95 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 2e-132 | 95 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 6e-129 | 93 |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 1e-52 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcSMS35_4791 | YP_001746705.1 | IS1203 transposase orfB | VFG1602 | Protein | 3e-129 | 93 |
