Gene Information

Name : EcSMS35_4784 (EcSMS35_4784)
Accession : YP_001746701.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4877157 - 4877723 bp
Length : 567 bp
Strand : -
Note : identified by similarity to GB:CAG75762.1

DNA sequence : 
ATGCCTAAATCTTATACACCAAACTGGTTTTTTACCGCTTTACTTGACAATCACATCAATCAAATGATGGCACGCTATTC
CTGCCTGCGGGCCTTACGCATGGATTTCTTCTACAGGAAAGATACGCCTGATTTCTTACAACCTGATCATCGCTGGCTTG
AATTGCAGTTGCGTATGCTGCTGGAGCAGGTGGAACAATTTGAAAATATCGTTGGCTTCTTCTGGGTGATTGAATGGACG
GCTGATCATGGTTTTCATGCGCATGCGGTTTTCTGGATCGATCGTCAGAGAGTTAAAAAAATATATCCCTTTGCGGAGCG
GATTACGGAATGCTGGCGGTCTATTACGCATAACAGCGGTTCGGTGCACCGTTGTACATATCAGCCGCATTATACATACA
ACATCAACATCCCCGTGCGTCATAACGATCCCGGGAGCATCGATAATATTCGCGGTGTCCTGCATTATCTGGCGAAAGAA
GAACAAAAAGACGGGCTGTGTGCCTACGGTTGCAATGAAGTTCCTGAACGGCCTGCTGCAGGGCGTCCTCGTAAGCCTCA
CTTCTGA

Protein sequence : 
MPKSYTPNWFFTALLDNHINQMMARYSCLRALRMDFFYRKDTPDFLQPDHRWLELQLRMLLEQVEQFENIVGFFWVIEWT
ADHGFHAHAVFWIDRQRVKKIYPFAERITECWRSITHNSGSVHRCTYQPHYTYNINIPVRHNDPGSIDNIRGVLHYLAKE
EQKDGLCAYGCNEVPERPAAGRPRKPHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33737.1 hypothetical protein Not tested PAI I 536 Protein 5e-87 99
APECO1_3514 YP_854261.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-84 97
ORF_20 AAZ04430.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-84 97
unnamed CAD42062.1 hypothetical protein Not tested PAI II 536 Protein 9e-85 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_4784 YP_001746701.1 hypothetical protein VFG1478 Protein 2e-87 99
EcSMS35_4784 YP_001746701.1 hypothetical protein VFG1581 Protein 4e-85 95