Gene Information

Name : EcSMS35_4783 (EcSMS35_4783)
Accession : YP_001746700.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4876335 - 4876910 bp
Length : 576 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence : 
ATGAATGCTATTCCTTATTTCGACTATAGCCTGGCCCCCTTCTGGCCGTCTTATCAGAGCAAAGTTATCGGCGTCCTTGA
GCGTGCGCTGCGTGAGCAGTCCGGCTCCCGGATACGGCGGATCCTGCTTCGTCTGCCGTGTGAATATGACAATACCTTCA
ACAGCAGAACGACCTGGTTTGGTATGGATTTTATCGAAACCGTCAGTGCGCTGATGAATGCAACACCCGGACGTGACCTC
TGCTGGCTCCTGACCCGTCATCCTGAAAAGCCGGAATACCACGTGGTGCTGTGTGTCAGACAGGAGTATTTCGATGGCCC
TGAACTGGACCGGCTGATTCTGGATGCCTGGAGCAACGTACTGGGTTTCGCGTCACCAGGTGAAGCAAAGCCGTACCAGA
AGCAGATCACCCGGGATGTGGTATTGGACAGTCGTTCACCGGACTGTGAAGACATCCTCAAAGAGTTGATATGGGCGTTC
AGCGATTTCGCCCGCGATCGTCGTGGTGTGTGCGATCCGGAAGCCCGTTGCCTCGCCGGTAATCCCGGCTATCCCGGATC
TGCAGGACCGTTCTGA

Protein sequence : 
MNAIPYFDYSLAPFWPSYQSKVIGVLERALREQSGSRIRRILLRLPCEYDNTFNSRTTWFGMDFIETVSALMNATPGRDL
CWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAKPYQKQITRDVVLDSRSPDCEDILKELIWAF
SDFARDRRGVCDPEARCLAGNPGYPGSAGPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33738.1 hypothetical protein Not tested PAI I 536 Protein 4e-76 96
APECO1_3515 YP_854260.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-74 95
ORF_19 AAZ04429.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-74 95
unnamed CAD42061.1 hypothetical protein Not tested PAI II 536 Protein 3e-72 94
c5193 NP_757041.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-72 89
unnamed AAL67421.1 unknown Not tested PAI II CFT073 Protein 5e-56 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_4783 YP_001746700.1 hypothetical protein VFG1479 Protein 2e-76 96
EcSMS35_4783 YP_001746700.1 hypothetical protein VFG1580 Protein 1e-72 94