Gene Information

Name : EcSMS35_4780 (EcSMS35_4780)
Accession : YP_001746697.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4875264 - 4875776 bp
Length : 513 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence : 
ATGCAGATAACCGAAGCATTACTTGCAGAGCCGGGAGACATCCGGCGTTTTGTTCAGCAGGCGGTGGACCACTGGCCACA
TCTGTTGGCATTTCGTTTCACTCTCCGTTCGGCAGAAGGAAGCATCAACGGGCAACAGATTCAGGTATTCTGTACTTCTT
TTTACCGACAGGTGCACGAACGTATTACTGAGAGTAATCACATGCTCAGTCCATCATCGCCGGTGGTATTACGCTGGTTG
CGGGAACAACATGGAGGGGCAACAATACGATGCCTGTTGCTGCTCAGCCAGGATCTTTTCTGCCATCCGCGAGCCAGTGC
CACGGTTGATGAAGCATGTTCACAACTGGTAGATTTACTGCAACAGACCTGGCAGGTGATAAGCGCTGGCGGACAATGTC
GGGTGGAAAGGTGTTTTCGGGTTGCCCGGCCTGATACATCAGAGCAATACGTTGCCTTAAAAACTGCTGTTCAGTCCCTG
ATGTCACTGGTTATTGCAACAATTATCCGGTGA

Protein sequence : 
MQITEALLAEPGDIRRFVQQAVDHWPHLLAFRFTLRSAEGSINGQQIQVFCTSFYRQVHERITESNHMLSPSSPVVLRWL
REQHGGATIRCLLLLSQDLFCHPRASATVDEACSQLVDLLQQTWQVISAGGQCRVERCFRVARPDTSEQYVALKTAVQSL
MSLVIATIIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1194 AAT48702.1 hypothetical protein Not tested PAI II 4787 Protein 2e-56 82
Z1634 NP_287137.1 hypothetical protein Not tested TAI Protein 2e-61 80
Z1194 NP_286729.1 hypothetical protein Not tested TAI Protein 2e-61 80
z1194 CAC43420.1 hypothetical protein Not tested PAI III 536 Protein 5e-55 80
unnamed CAD42059.1 hypothetical protein Not tested PAI II 536 Protein 8e-61 78
ECO111_3777 YP_003236112.1 hypothetical protein Not tested LEE Protein 1e-46 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_4780 YP_001746697.1 hypothetical protein VFG1638 Protein 2e-55 80
EcSMS35_4780 YP_001746697.1 hypothetical protein VFG1578 Protein 3e-61 78