Gene Information

Name : nrfC (EcSMS35_4534)
Accession : YP_001746462.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : cytochrome c nitrite reductase, Fe-S protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : 1.7.2.2
Position : 4635866 - 4636537 bp
Length : 672 bp
Strand : +
Note : identified by match to protein family HMM PF00037; match to protein family HMM TIGR01409; match to protein family HMM TIGR03149

DNA sequence : 
ATGACCTGGTCACGTCGCCAGTTTCTCACCGGCGTCGGTGTGCTGGCCGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGC
GAAAACGTTGAATATCAATGGTGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGG
ATGCTTGTCGGAAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACGATTATTCGTAGCGAGCCGCAGGGCGAATTT
CCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCGTGCGCCGTGCGTTGACGTCTGCCCGACCGG
TGCGTCTTTTCGCGATGCCGCCAGCGGGATTGTCGATGTAAATCCGGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCG
CCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACAGCGGACAAATGCGATTTCTGCCGTAAGACCAATTTG
CAGGCCGGTAAGCTGCCCGCGTGCGTTGAGGCTTGCCCGACGAAGGCGCTGACGTTTGGCAATCTGGACGATCCTAACAG
TGAGATTTCGCAACTGCTGCACCAGAAGCCTACTTACCGCTACAAGCTGGCGCTGGGAACCAAACCGAAGCTGTACCGCG
TACCGTTTAAATACGGGGAGGTGAGCCAATGA

Protein sequence : 
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACRKVNKVPEGVSRLTIIRSEPQGEF
PDVKYRFFRKSCQHCDRAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
QAGKLPACVEACPTKALTFGNLDDPNSEISQLLHQKPTYRYKLALGTKPKLYRVPFKYGEVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 7e-32 41
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 7e-32 41
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-31 41
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-31 41
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 8e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nrfC YP_001746462.1 cytochrome c nitrite reductase, Fe-S protein VFG0486 Protein 4e-32 41