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Name : lpfA (EcSMS35_4096) Accession : YP_001746058.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : long polar fimbrial operon protein LpfA Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 4190762 - 4191334 bp Length : 573 bp Strand : - Note : identified by match to protein family HMM PF00419 DNA sequence : ATGAAGCGTAATATTATAGGCGGTGCATTCACTCTGGCATCTTTAATGCTGGCCGGACATGCACTGGCAGAAGATGGTGT TGTTCACTTCGTCGGTGAAATTGTCGACACTACTTGTGAAGTTACCTCCGATACAGCCGATCAAACCGTCCCACTGGGTA AAGTCAGTAAAAATGCATTTTCAGGTGTAGGTAGTCTGGCGTCACCACAGCAGTTCAGTATTAAACTTGAAAAGTGCCCG GCAACCTACACTCAGGCAGCCGTTCGTTTTGATGGTACAGAAGCGCCTGGCGGCGACGGCGACCTGAAAGTGGGTACGCC GCTTACAGCGGGCAACCCTGGCGATTTTACCGGTACAGGACAAGCGATTGCGGCAACGGGTGTCGGTATTCGTATTTTTA ACCAGTCAGATAACTCGCAGGTTAAACTTTATAACGATTCTGCCTATACCGCTATCGACGCGGAAGGCAAGGCTGAAATG AAGTTTATTGCACGCTATGTGGCAACCAATGCAACCGTAACGGCGGGTACGGCGAACGCCGATTCACAATTTACTGTCGA ATATAAGAAATAA Protein sequence : MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQTVPLGKVSKNAFSGVGSLASPQQFSIKLEKCP ATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEM KFIARYVATNATVTAGTANADSQFTVEYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfA | YP_006098367.1 | putative major fimbrial subunit | Not tested | Tn2411 | Protein | 8e-78 | 100 |
