|
Name : lpfB (EcSMS35_4095) Accession : YP_001746057.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : long polar fimbrial operon protein LpfB Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 4189983 - 4190714 bp Length : 732 bp Strand : - Note : identified by similarity to GB:AAL18162.1; match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGTCCAGAAAAAGTTGTTTAATCAGGCTCTTTAAAACAACCGTTTCATGTAAGTTATTTACCGCGATTATACTCAGTGT TTTTTTAGTCCAACCAGCATTAACCTATGCAGGCGTTGTCATTGGTGGTACACGGGTAGTTTACTTAAGTAATAACCCAG ATAAATCTATTTCTGTATTTAGCAAGGAAGAAAAAATTCCTTATCTCATCCAGGCATGGGTAGATCCGTTTAATAAAGAG GATAAAAGCAAAGCACCGTTTACCGTTATTCCTCCGGTATCACGATTAGAACCCGCGCAAGAAAAAGTATTACGCATTAT TCATACCAAAGGTGTGTCATTGCCTGATGATCGCGAGTCAGTCTTCTGGCTGAATATTAAAAATATTCCGCCCTCTGCGA GCAACAAAGCGGCGAACTCACTGGAAATCGCAGTTAAAACGCGTATCAAGCTGTTCTGGCGACCGGCAAGCATTCGCCTG ATTCCCGAAGATGCTGCACCGAAGGTGAAGTGGCACCGGGAAGGGCGAAACCTGATTGCAGAGAATCCCAACCCGATTCA TATCAGTGTGATGGATGTCATCGTTGATGGTCATGATGTGCCCCTCAACATGCTCCGTCCTTTTGAAACGCTCACGTTAC CTTTACCTGCTAATTCTGCGGGAGGCCAAATGATCTGGCGATTTATTAATGATTACGGCGCAGTCAGTGACCCGATAAAA ATGACGCTGTAA Protein sequence : MSRKSCLIRLFKTTVSCKLFTAIILSVFLVQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPFNKE DKSKAPFTVIPPVSRLEPAQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSASNKAANSLEIAVKTRIKLFWRPASIRL IPEDAAPKVKWHREGRNLIAENPNPIHISVMDVIVDGHDVPLNMLRPFETLTLPLPANSAGGQMIWRFINDYGAVSDPIK MTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfB | YP_006098366.1 | fimbrial chaperone protein | Not tested | Tn2411 | Protein | 5e-111 | 99 |
