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Name : EcSMS35_4018 (EcSMS35_4018) Accession : YP_001745981.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : putative type III secretion chaperone SicA Function : - COG functional category : - COG ID : - EC number : - Position : 4097155 - 4097652 bp Length : 498 bp Strand : + Note : identified by match to protein family HMM PF07720; match to protein family HMM TIGR02552 DNA sequence : ATGGAAAGCGCAAATCTGGATTTAGAAGAAAATAAAGAAATTGCCAGTAAGTTCGAACGTGCATTAGGTATGGGAGCAAC GCTTGCAGAGCTGCATGGCATAACCCCGGATACCCTTGAAGGCGTTTATGCTTACGCTTATAACTTTTATGAAAAAGGAA GACTTGACGAAGCTGAACTTTTTTTTAAATTTCTCTGTATTTATGATTTCCAAAATTATAACTACTTAAAAGGATATGCC GCCGTCTGTCAATTGAAGAAAGATTATCAAAAGGCATTCGACATGTATCATATCTGTTTAATGCTATCTCCCGATAACGA TTTCTCTTTGGTTTATTATATGGGTCAATGCCAGATGGGCTTAAAAAACATTAAAATGGCCACGGAGTTATTTAATACAG TCGTAACCTATAGTCAAAATGAAAAAATTAAAGAGATGGCTACAACTTATCTTGAACTTTTGACAGCCAATTCCGAAGAG GAAGTTCAAACAGAGTGA Protein sequence : MESANLDLEENKEIASKFERALGMGATLAELHGITPDTLEGVYAYAYNFYEKGRLDEAELFFKFLCIYDFQNYNYLKGYA AVCQLKKDYQKAFDMYHICLMLSPDNDFSLVYYMGQCQMGLKNIKMATELFNTVVTYSQNEKIKEMATTYLELLTANSEE EVQTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaT | NP_457280.1 | unknown function | Virulence | SPI-1 | Protein | 2e-27 | 47 |
| spaT | NP_806489.1 | hypothetical protein | Virulence | SPI-1 | Protein | 2e-27 | 47 |
| sicA | NP_461807.1 | secretion chaperone | Virulence | SPI-1 | Protein | 2e-27 | 47 |
| sicA | YP_217805.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-27 | 47 |
| ECs3708 | NP_311735.1 | hypothetical protein | Not tested | LIM | Protein | 6e-34 | 45 |
| sycB | AAS66850.1 | SycB | Not tested | SSR-1 | Protein | 1e-19 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcSMS35_4018 | YP_001745981.1 | putative type III secretion chaperone SicA | VFG0547 | Protein | 4e-28 | 47 |
| EcSMS35_4018 | YP_001745981.1 | putative type III secretion chaperone SicA | VFG0988 | Protein | 1e-28 | 42 |
| EcSMS35_4018 | YP_001745981.1 | putative type III secretion chaperone SicA | VFG2451 | Protein | 1e-28 | 41 |
| EcSMS35_4018 | YP_001745981.1 | putative type III secretion chaperone SicA | VFG1769 | Protein | 5e-22 | 41 |
