|
Name : EcSMS35_4006 (EcSMS35_4006) Accession : YP_001745969.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : AlpA family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3311 EC number : - Position : 4087811 - 4088077 bp Length : 267 bp Strand : + Note : identified by match to protein family HMM PF05930 DNA sequence : ATGCAAGCTGTTTTTTCTTCCCCGTCTCCCGCCCCTGTGACGCCACTGATGCCGCTGCCGGACATCACGCAGGAGCGTTT TTTACGTCTGCCGGAAGTGATGCACCTGTGCGGCCTGTCACGCTCGACCATCTATGAACTCATCCGTAAGGGGGAATTTC CGCCGCAGGTGAGTCTTGGCGGTAAAAATGTGGCCTGGCTGCACTCTGAAGTCACCGCATGGATGGCCGGACGCATTGCC GGACGCAAACGGGGGTACGACGCATGA Protein sequence : MQAVFSSPSPAPVTPLMPLPDITQERFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGRIA GRKRGYDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4828 | NP_458906.1 | phage DNA binding protein | Not tested | SPI-10 | Protein | 1e-22 | 70 |
| VC0395_A1382 | YP_001217325.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 3e-10 | 50 |
| VPI2_0033 | AAX20900.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 2e-10 | 50 |
| VC1785 | NP_231420.1 | transcriptional regulator | Not tested | VPI-2 | Protein | 3e-10 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcSMS35_4006 | YP_001745969.1 | AlpA family transcriptional regulator | VFG1118 | Protein | 9e-11 | 50 |
