|
Name : gltS (EcSMS35_3988) Accession : YP_001745953.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : sodium/glutamate symporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0786 EC number : - Position : 4065349 - 4066554 bp Length : 1206 bp Strand : - Note : identified by match to protein family HMM PF03616; match to protein family HMM TIGR00210 DNA sequence : ATGTTTCATCTCGATACTTTAGCAACGCTTGTTGCCGCAACGCTGACGTTGCTGCTCGGGCGCAAGTTGGTCCATTCCGT CTCCTTTTTGAAGAAATACACCATACCGGAACCTGTTGCGGGTGGTTTATTAGTGGCGCTGGCGCTGCTGATACTGAAAA AAAGCATGGGCTGGGAAGTCAACTTTGATATGTCCCTGCGCGATCCGTTGATGCTGGCTTTCTTCGCCACCATTGGCCTG AACGCCAACATTGCCAGTTTGCGTGCCGGTGGGCGTGTGGTTGGCATCTTCTTGATTGTGGTTGTTGGCCTGTTGGTGAT GCAAAATGCCATTGGCATTGGTATGGCTAGCCTGTTAGGGCTTGATCCGCTGATGGGGCTGTTGGCCGGTTCTATTACGC TTTCCGGCGGTCACGGTACGGGAGCTGCATGGAGTAAATTGTTCATTGAACGTTATGGCTTCACCAATGCGACAGAAGTG GCGATGGCCTGTGCAACGTTCGGTTTGGTGCTGGGCGGCTTGATTGGCGGTCCGGTGGCACGCTATCTGGTGAAACACTC CACCACACCGAACGGTATTCCGGATGACCAGGAAGTTCCGACCGCGTTCGAAAAGCCGGATGTGGGCCGCATGATCACCT CGCTGGTGTTGATTGAAACTATCGCGCTGATTGCTATCTGCCTGACGGTGGGGAAAATTGTTGCGCAACTTTTGGCTGGT ACTGCTTTTGAACTACCGACCTTCGTCTGTGTACTATTTGTTGGCGTGATTCTGAGCAACGGTCTGTCAATGATGGGCTT TTACCGCGTCTTTGAGCGAGCGGTATCCGTGCTGGGTAACGTAAGCCTGTCGTTGTTCCTGGCGATGGCGTTGATGGGGC TGAAACTGTGGGAGCTGGCTTCGCTGGCGCTGCCGATGCTGGCGATTCTGGTGGTACAGACCATCTTCATGGCGTTGTAT GCCATCTTCGTTACCTGGCGCATGATGGGCAAAAACTACGATGCGGCAGTGCTGGCTGCGGGTCACTGTGGCTTTGGCCT TGGCGCAACGCCAACAGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTCCTGGTAG TGCCGATGGTCGGTGCGTTCTTTATCGATATCGTCAATGCGCTGGTGATTAAGCTGTATTTGATGTTGCCGATTTTTGCC GGTTAA Protein sequence : MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLILKKSMGWEVNFDMSLRDPLMLAFFATIGL NANIASLRAGGRVVGIFLIVVVGLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAG TAFELPTFVCVLFVGVILSNGLSMMGFYRVFERAVSVLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALY AIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFA G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AEA34672.1 | sodium/glutamate symport carrier protein | Not tested | Not named | Protein | 3e-73 | 53 |
| gltS | NP_273147.1 | sodium/glutamate symport carrier protein | Not tested | IHT-A | Protein | 2e-66 | 50 |
