Gene Information

Name : EcSMS35_3251 (EcSMS35_3251)
Accession : YP_001745231.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3322667 - 3327223 bp
Length : 4557 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGG
TGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC
CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAGCCTACGCCAGAACCGATACCTGATCCTGAACCAACACCA
GAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCAGCGGGTAACTGGTGCTACCTG
TAATGGTGAATCCAGCGATGGCTTTACATTTAAACCTGGCGAGGACGTTACTTGCGTGGCGGGTAACACGACAATTGCCA
CCTTCAACACTCAGTCAGAAGCTGCGCGTAGCTTGCGTGCGGTTGAAAAAGTGTCGTTTAGCCTTGAGGACGCGCAAGAA
CTGGCGGGCTCCGATGACAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCAGTAACAGCTGTCCGGCGAATACAGAACA
GGTTTGTCTGACGTTCTCCTCGGTGATCGAGAGTAAACGCTTCGACTCGCTGTATAAGCAAATCGATCTGGCACCGGAAG
AGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCTGCGACCGATAAAGCGCCATCCACTCATACTTCACCGGTC
GTGCCCGTCACCACGCCGGGAACAAAACCGGATCTGAACGCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTATCAGTA
TCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAGCCAGGGATATGGTGTTGCTGGCGTCAACTACTACA
CCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCTTTAGCTGGGGCGAAACCATCTCCTTTGGTATCGAT
ACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCGCTGACTGAACTGGGTGATGAAGTTCGCGGGGCGAA
TATTGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTTGTTCCGGAGGATGTACGCAAGGTCT
TTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAACGGTGCGACGCTGGGGGAAGGTGAGCAA
GTCGTTAATCTGCCTAACGAATTTATTGAGCAGTTTAATACGGGTCAGGCCAAAGAGATCGATACCGCGATTTGTGCGAA
AACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCCAGATTCAGGGCGTTATCA
ACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGCAAGTTCCATGTATTCCATGACTCCACCAACTTCTATGGC
AGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAATGATAA
AAACTACTGGCTGGCCTTCGGCGAGAAACGGGCCTGGGATAAAAATGAGCTGGCGTACATTACTGAAGCGCCTTCCATTG
TGCGACCAGAGAACGTGACACGCGAAACAGCCACCTTCAACCTGCCGTTTATTTCGCTGGGGCAAGTGGGCGATGGCAAG
CTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGCCCGAACGGTTACAGCTGGAACGGGGGCGTTAATAA
AGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGTCAAATG
ATCGCTGGTTGCCGGATGCAAAATCCAATATGACCGTGGGTACTAACCTGGACACGGTGTATTTCAAAAAACACGGGCAG
GTTACAGGAAATAGTGCTGCGTTCGGCTTTCATCCGGATTTTGCGGGTATCTCTGTTGAGCATTTAAGTAGCTATGGCGA
TCTCGACCCGCAGGAAATGCCGCTGCTGATCCTCAACGGCTTTGAGTATGTGACTCAGGTTGGTAACGATCCTTATGCAA
TCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGATTTGATCGCCTATATGAACAAAGGT
GGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCATCTGGCTTTGTACGTCTGCTTGATGC
CGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGATCCGCAAGGCTACCCGGACCGCGTTCGTCAACGAC
GTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATGGTAAACCACCGTATACCATTGATGACACCACGAAA
GAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCAGGAAGAAGT
TGAGGGTAAACAGGTAACTCAATTCGCCTTTATCGATGAAGCCGACCACAAAACGCCTGAGTCACTGGCTGCGGCGAAGA
AGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGAGTGTAAGGATTCTGACTACCACTATGAGGTCAACTGTCTGGAATAT
CGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATACGCAACTAAGCCTTAACGCCGACACTGC
GAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTTTACTTCCGTACCAATG
GTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAATAAAATT
GAATATCGCTATGAAAACGACAAGGATGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGTTACGCCAACAA
TGCTTATGATGGTGGCACGCAGTGCTCCGCAGAGCTGAAACAATCGCTGATCGATAACAAGATGATCTACGGTGAAGGCA
GCAAAGCGGGCATGATGAACCCGAGCTATCCGCTTAACTATATGGAAAAACCGCTGACGCGCCTGATGCTGGGGCGTTCC
TGGTGGGATCTGAACATCAAGGTTGATGTCGAGAAGTATCCGGGGGCGGTATCGGCTGAAGGTGAGGAGGTTACTGAAAC
CATCAACCTGTACTCGAATCCGACCAAATGGTTTGCGGGTAACATGCAGTCTACTGGCCTGTGGGCTCCGGCTCAGCAGG
AAGTCAGCATTAAGTCCAATGCGAAAGTCCCTGTGACTGTTACCGTGGCGCTGGCTGACGACCTGACCGGGCGTGAGAAG
CATGAGGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACATACTCTCTGGATGCTAGCGGCACGGTGAAGTTCAAGGT
TCCTTACGGTGGTCTGATTTATATCAAGAGCGACAGTAAAGAGGAGAAATCAGCCAACTTCACCTTTACTGGCGTGGTAA
AAGCGCCGTTCTATAAAGACGGTAAATGGAAAAACGACCTGAAATCCCCTGCGCCGTTGGGTGAGCTGGAGTCTGCGTCG
TTCGTCTATACCACGCCGAAGAAGAACCTTGAGGCCAGCAATTACAAGGGCGGTCTGAAACAATTCGCTGAGGATCTGGA
TACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTGATGGCGAAAGCGGTAAGCACCGGATGTTTACCTATGAAGCAT
TGACGGGGCACAAACATCGTTTCACCAACGATGTGCAGATCTCCATCGGTGATGCGCACTCTGGTTATCCGGTGATGAAC
AGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCACGAAGTAGGGCACAA
CGCTGCAGAAACGCCGCTGACTGTACCGGGCGCAACTGAAGTGGCGAACAACGTGCTGGCGCTGTACATGCAGGATCGTT
ATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTTGCGCCGGAATATCTGGAGGAGAGCAACGGTCAGGCATGG
GCGCGTGGCGGTGCGGGTGACCGTCTGCTGATGTACGCGCAGCTGAAGGAATGGGCAGAGAAAAACTTTGATATCAAACA
GTGGTATCCAGAAGGCTCTCTGCCAGCGTTCTACAGCGAGCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGTTGATGC
ACCGTAAAGCACGCGGCGATGATGTTGGCAATGACAAATTTGGCAACAGAAACTACTGTGCCGAATCCAACGGTAACGCT
GCCGACACGCTGATGCTGTGTGCATCCTGGGTCGCTCAGACGGACCTTTCCGCATTCTTTAAGAAATGGAATCCGGGCGC
GAATGCTTACCAGTTGCCGGGAGCGACAGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCTTACAACACGCTCGCGT
CACTCGATCTGCCGAAACCGGAACAGGGACCGGAAACCATTAATCAGGTTACCGAGCATAAGATGTCTGCCGAGTAA

Protein sequence :
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTP
EPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQE
LAGSDDKKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPV
VPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGID
TFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPEDVRKVFAEYPNVINEIINLSLSNGATLGEGEQ
VVNLPNEFIEQFNTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYG
STGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQVGDGK
LMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSNMTVGTNLDTVYFKKHGQ
VTGNSAAFGFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYMNKG
GSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTIDDTTK
EVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKKRILDAFPGLEECKDSDYHYEVNCLEY
RPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNKI
EYRYENDKDDELGFKTFTEFLNCYANNAYDGGTQCSAELKQSLIDNKMIYGEGSKAGMMNPSYPLNYMEKPLTRLMLGRS
WWDLNIKVDVEKYPGAVSAEGEEVTETINLYSNPTKWFAGNMQSTGLWAPAQQEVSIKSNAKVPVTVTVALADDLTGREK
HEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKSDSKEEKSANFTFTGVVKAPFYKDGKWKNDLKSPAPLGELESAS
FVYTTPKKNLEASNYKGGLKQFAEDLDTFASSMNDFYGRDGESGKHRMFTYEALTGHKHRFTNDVQISIGDAHSGYPVMN
SSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAW
ARGGAGDRLLMYAQLKEWAEKNFDIKQWYPEGSLPAFYSEREGMKGWNLFQLMHRKARGDDVGNDKFGNRNYCAESNGNA
ADTLMLCASWVAQTDLSAFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLDLPKPEQGPETINQVTEHKMSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85238.1 hypothetical protein Not tested PAI V 536 Protein 0.0 90
VC0395_A0370 YP_001216326.1 lipoprotein Not tested VPI-1 Protein 0.0 49
VC0845 NP_230493.1 hypothetical protein Not tested VPI-1 Protein 0.0 49
acfD AAK20802.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75649.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75655.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75652.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75646.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75664.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75670.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75661.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75658.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75667.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_3251 YP_001745231.1 hypothetical protein VFG0106 Protein 0.0 49