Gene Information

Name : gspG (EcSMS35_3244)
Accession : YP_001745224.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : general secretion pathway protein GspG
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3314929 - 3315384 bp
Length : 456 bp
Strand : -
Note : identified by similarity to GB:AAL60187.1; match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence :
ATGAATTCGTTATCCCGCACACAAAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTGGTGCCTAACCTGCTGGGCAACAAAGAGAAAGCCGATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAAAACGCGCTGGATATGTACCGACTGGATAACGGGCGTTATCCGACCACCGAACAGGGACTGGAGGCGCTG
ATCCAGCAGCCAGCCAATATGGCGGACGCCCGCAACTACCGTACCGGTGGATACATCAAACGACTGCCAAAGGATCCGTG
GGGCAATGATTATCAGTATCTCAGCCCAGGTGAAAAAGGGCTGTTTGATGTTTATACCCTGGGAGCAGATGGTCAGGAAA
ACGGGGAGGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence :
MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADARNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-66 100
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-66 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_001745224.1 general secretion pathway protein GspG VFG2050 Protein 3e-66 99
gspG YP_001745224.1 general secretion pathway protein GspG VFG0180 Protein 2e-37 55
gspG YP_001745224.1 general secretion pathway protein GspG VFG1871 Protein 1e-33 53