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Name : gspK (EcSMS35_3240) Accession : YP_001745220.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : general secretion pathway protein GspK Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3156 EC number : - Position : 3312415 - 3313392 bp Length : 978 bp Strand : - Note : identified by similarity to GB:AAL10700.1; match to protein family HMM PF03934 DNA sequence : ATGATCACCTTGCCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCGGTTATGATGCTGGTGACCAT CACGCTTTCCGGGCGGATGCAGCAACAACTTGGGCGAACGCGCAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCG CCAGTGCAGAAAGCCTGGCGCTGAGCGCGCTCAGTCTGAGCCTGAAAAATGAAAAGCGTGTGCATCTGGCACAACCGTGG GCTTCTGGCCCGCGTTTTTTCCCACTGCCGCAGGGGCAAATTGCCGTCACTCTGCGTGACGCACAGGCCTGCTTTAACCT GAATGCCCTCGCTCAGCCGACGACGACGTCGCGTCCGCTCGCGGTACAACAACTGATTGCCCTGATCTCGCGCCTCGATG TGCCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGGAGTTTATTGACGAAGACCGCAGTGTGCAGACGCGTCTG GGTCGTGAAGACAGCGAGTATCTCGCCCGCTCGGTGCCGTTCTACGCCGCTAATCAACCGCTGGCTGATATCAGCGAGAT GCGCGTGGTGCAGGGAATGGACGCTGGGCTTTATCAAAAACTGAAACCGCTGGTCTGTGCGCTGCCGATGGCCCGCCAGC AAATCAACATCAATACATTAGATGTCACGCAAAGTGTGATTCTTGAGGCGCTGTTTGACCCGTGGTTAAGCCCTGTTCAG GCGCGGGCGTTATTACAACAACGTCCGGCGAAGGGCTGGGAAGATGTCGATCAGTTTCTTGCTCAGCCGCTACTTGCAGA CGTCGATGAGCGTACTAAAAAACAGCTAAAAACCATCCTGAGCGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCA CCGTGAATGAGATTGAACTGACGATGAATTCGTTAATTGTCCGCATGGGCCCACAACACTTTTCTGTTCTCTGGCATCAG ACAGGAGAAAGTGAGTGA Protein sequence : MITLPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLAQPW ASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTTSRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMARQQININTLDVTQSVILEALFDPWLSPVQ ARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQLKTILSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQ TGESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | Protein | 5e-126 | 99 |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-126 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspK | YP_001745220.1 | general secretion pathway protein GspK | VFG2054 | Protein | 3e-125 | 98 |
