Gene Information

Name : kpsM (EcSMS35_3235)
Accession : YP_001745215.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : polysialic acid capsule biosynthesis transport protein KpsM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 3306990 - 3307766 bp
Length : 777 bp
Strand : -
Note : identified by similarity to SP:P23889; match to protein family HMM PF01061

DNA sequence : 
ATGGCAAGAAGTGGATTTGAAGTCCAGAAAGTCACCGTAGAGGCATTATTTCTACGAGAAATACGAACACGCTTTGGTAA
GTTCCGTCTGGGATATTTGTGGGCGATTCTCGAACCCTCCGCGCATTTGCTGATACTGTTGGGAATTTTGGGTTACGTTA
TGCACCGCACTATGCCAGACATCTCGTTCCCGGTGTTTTTACTTAATGGCCTGATTCCCTTTTTTATCTTTAGTAGTATT
AGCAAACGTTCTATTGGTGCTATTGAAGCGAACCAGGGGCTGTTTAATTATCGACCAGTAAAACCCATCGATACGATCAT
TGCACGTGCACTGCTTGAGACACTGATTTACGTTGCTGTTTATATTTTGCTCATGCTTATCGTCTGGATGACAGGCGAAT
ATTTCGAAATTACAAACTTTTTACAACTTGTGCTCACCTGGAGTTTGTTAATCATTCTTTCATGTGGCGTCGGCTTAATA
TTTATGGTCGTTGGTAAAACCTTTCCTGAAATGCAAAAGGTCCTGCCGATACTGCTTAAGCCGCTGTATTTCATCTCCTG
CATCATGTTCCCTCTACACTCGATTCCAAAGCAATACTGGTCATATCTACTCTGGAACCCATTAGTGCATGTTGTGGAGT
TAAGCCGCGAGGCAGTTATGCCTGGCTATATCAGTGAAGGCGTGAGTCTGAACTACCTTGCAATGTTTACTCTGGTCACC
CTGTTCATCGGCCTAGCATTATACCGAACGCGTGAAGAGGCAATGCTGACATCATGA

Protein sequence : 
MARSGFEVQKVTVEALFLREIRTRFGKFRLGYLWAILEPSAHLLILLGILGYVMHRTMPDISFPVFLLNGLIPFFIFSSI
SKRSIGAIEANQGLFNYRPVKPIDTIIARALLETLIYVAVYILLMLIVWMTGEYFEITNFLQLVLTWSLLIILSCGVGLI
FMVVGKTFPEMQKVLPILLKPLYFISCIMFPLHSIPKQYWSYLLWNPLVHVVELSREAVMPGYISEGVSLNYLAMFTLVT
LFIGLALYRTREEAMLTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsM YP_854397.1 polysialic acid transport protein KpsM Not tested PAI I APEC-O1 Protein 2e-108 100
kpsM CAE85224.1 KpsM protein Virulence PAI V 536 Protein 5e-81 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsM YP_001745215.1 polysialic acid capsule biosynthesis transport protein KpsM VFG1450 Protein 8e-109 100