|
Name : EcSMS35_3227 (EcSMS35_3227) Accession : - Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 3299416 - 3299715 bp Length : 300 bp Strand : - Note : IS21 transposase orfA, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by similarity to SP:P51026; match to protein family HMM PF01527 DNA sequence : ATGATTGATGTCTTAGGACCGGAGAAACGCAGACGGCGTACTACACAGGAAAAGATCGCTATTGTTCAGCAGAGCTTTGA ACAGGGAATGACGGTCTCCCTTGTTGCCCGGCAACACGGTGTGGCAGCCAGCCAGTTATTTCTCTGGCGCAAGCAATACC AGGAGGGAAGTCTTACTGCTGTGGCTGCCGGAGAACAGGTCGTTCCTGCCTCTGAACTTGCTGCTGCCATGAAGCAGATT AAAGAACTCCAGCGCCTGCTCGGCAAAAAAACGATGGAAAATGAAATCGGCTTTGTTTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67376.1 | insertion sequence protein | Not tested | PAI II CFT073 | DNA | e-141 | 98.2 |
| insC | YP_002414034.1 | IS2 insertion element repressor InsA; KpLE2 phage-like element | Not tested | Not named | DNA | e-141 | 98.2 |
| tnpG | AAD44740.1 | TnpG | Not tested | SHI-2 | DNA | e-147 | 95.1 |
| S3188 | NP_838471.2 | insertion sequence 2 OrfA protein | Not tested | SHI-1 | DNA | e-147 | 95.1 |
| unnamed | AAL57520.1 | IS2 transposase | Not tested | LEE | DNA | e-146 | 94.7 |
| S4060 | NP_839229.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | DNA | e-146 | 94.7 |
| S4049 | NP_839217.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | DNA | e-147 | 94.7 |
| ECO26_5247 | YP_003232129.1 | insertion sequence 2 OrfA protein | Not tested | LEE | DNA | e-145 | 94.4 |
| st02 | CAC81840.1 | ST02 protein | Not tested | LEE II | DNA | e-145 | 94.4 |
| unnamed | - | - | Not tested | LEE | DNA | e-139 | 94.4 |
