Gene Information

Name : EcSMS35_3215 (EcSMS35_3215)
Accession : YP_001745198.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3287308 - 3288174 bp
Length : 867 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGATATCACAGCCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGACTGAAATCTCAGTTCTGACGGAAA
GCATTGGAGGTAAAACCGCCCGGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTGATGGATAAACCGGAA
ACAGCAATGAAAGCCATCACCCGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGATACATGGTACCGGTCACTGGAATACGATAATTTTCCGGAAATCAGTGAAGCGAACATTC
TGAGCACATTTGAACAACTGCACCAGAACAAAGATGAAGTGTTTGAGCGTGGGGTGATCAATGTTTTCAGGGGACTGAGC
TGGAATTACGAAAACAATTCACCCTGTAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACCGGTGGGG
GTTTCATCTTATCACCGGGCAACAGGCAGATCGACTTGCCGACCTGGAAAGAATGCTGTATCTGTTCAGCGGCAAACCGA
TCCCCGACAACCGGGAAAACATCACCATTCATCTGGATGACCACATCCAGTCTGTTCAGGGTAAAGAGGACTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCACATCACGTTCAGGAAACCAGAACTGGTTGACAGGCTTAA
TGATATTATTGCCAGACACTACTCGGAAGCCCTGGCAAGCACAGTGAACAAAAGCCGCAAGGCATAA

Protein sequence :
MSDITASRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLTEISVLTESIGGKTARDWAMKQDFRCGCWLMDKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLS
WNYENNSPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLYLFSGKPIPDNRENITIHLDDHIQSVQGKEDYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIARHYSEALASTVNKSRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 2e-124 94
unnamed AAL57572.1 unknown Not tested LEE Protein 2e-123 94
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 2e-124 94
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 8e-122 93
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 2e-122 93
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 4e-121 90
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 4e-121 90
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 8e-120 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-121 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-121 89
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 4e-119 89
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 3e-119 88
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 4e-119 88
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 4e-119 88
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 8e-108 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_3215 YP_001745198.1 hypothetical protein VFG1533 Protein 5e-122 93
EcSMS35_3215 YP_001745198.1 hypothetical protein VFG0666 Protein 2e-119 88
EcSMS35_3215 YP_001745198.1 hypothetical protein VFG1685 Protein 5e-108 85