Gene Information

Name : EcSMS35_3213 (EcSMS35_3213)
Accession : YP_001745196.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3286526 - 3287014 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTACTCTCGCTGAACTGATTAACGTGGTCTGCGATAACGGTTACTCCCTTCGTGTTGTTGATGAATCTGACCGGG
CATCAGCAGAGCGCACGCCACCATCTGCGGCCCTTACCGGCATACGCTGCAGTACCGCACATATCACGGAAACGGACAAT
GCCTGGTTGTACTCGCTGTCACATCAGACGAATGACTTCGGCGAATCAGAATGGATTCATTTTACAGGTAGCGGATATCT
GTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAACGCCTGGGACTGTCAAAAACGTTCCGCCGTCTGGTTG
TCACACTTATCCGGCGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCTGACCTGCCCACTTTC
GACTGGTAA

Protein sequence :
MKLALTLEADSINVQALNMGRIVVDVDGVTLAELINVVCDNGYSLRVVDESDRASAERTPPSAALTGIRCSTAHITETDN
AWLYSLSHQTNDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAECLPDLPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 6e-70 98
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 6e-67 93
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 6e-67 93
unnamed AAL08479.1 unknown Not tested SRL Protein 4e-66 92
unnamed AAC31487.1 L0008 Not tested LEE Protein 4e-67 92
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 6e-67 92
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 4e-67 92
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 6e-67 92
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 1e-63 91
unnamed AAL57574.1 unknown Not tested LEE Protein 8e-57 91
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-64 91
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 4e-64 91
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 1e-62 90
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 6e-64 88
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 1e-62 87
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-60 86
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-60 86
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 4e-61 85
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 4e-61 85
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 3e-62 85
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 8e-62 84
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 6e-60 84
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 3e-54 84
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 3e-53 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_3213 YP_001745196.1 hypothetical protein VFG1621 Protein 2e-70 98
EcSMS35_3213 YP_001745196.1 hypothetical protein VFG0787 Protein 2e-67 92
EcSMS35_3213 YP_001745196.1 hypothetical protein VFG1070 Protein 2e-66 92
EcSMS35_3213 YP_001745196.1 hypothetical protein VFG1683 Protein 2e-64 91
EcSMS35_3213 YP_001745196.1 hypothetical protein VFG1531 Protein 4e-63 90
EcSMS35_3213 YP_001745196.1 hypothetical protein VFG0664 Protein 1e-61 85