Gene Information

Name : EcSMS35_3198 (EcSMS35_3198)
Accession : YP_001745181.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3277010 - 3277741 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
ATGAATCAACCAATACACAATGCTTACTGGTTATCCCGTTTTGAAAGTATTCTCAACAGTGCCCTGGCGCAACACCGTGT
CGTCTCGTTAATCCGGATGGATTTACGTTTCCCTGAGTATATGCCTGTCACCATCATGGATCCCGATTCGGATTCAGCGG
TGATTTCTCGTTTTTTCGAATCCCTGAAAGCAAAAATTCAGGCTTACCAGCGACATAAACGACGTGCCAACAAGCGTGTG
CGTGCAACCACTCTGCGTTATTTCTGGTGTCGGGAGTTTGGCAAGGAAAAAGGCAGGAAACATTATCACGTGATATTACT
GCTCAACAAAGATACCTGGTGCTCGCTAGGGGATTTCACCGTTCCTTCTTCGCTGGCGACGCTGATCAAGCTGGCATGGT
GTAGCGCTCTGCATCTTGAACCCTGGCAGGGTAATGGACTGGTTCATTTTTCCAGGCGGACGCCTTTCCGTAAACCGGCA
TCATCTGATGCTCGCCCTTCTTCCGATGATACGCCTTTGTCGGGTGGATGTTCTGATACCCGGAAAGCTTCTGACAAAAA
ATCTGGTGGATCCGCTGTGCTCTGGGTCAAGCGTGGTGATGTGGAAGCGATGCAGAAAGCCATGGAGAGAGCCTGTTATC
TCGTGAAGTATGAGACGAAGCAGCATGACGGTTCTGGTCAACGTAATTATGGTTGCAGTCGTGGGCCGGGGCGTTTACTG
GATGGCAGGTGA

Protein sequence : 
MNQPIHNAYWLSRFESILNSALAQHRVVSLIRMDLRFPEYMPVTIMDPDSDSAVISRFFESLKAKIQAYQRHKRRANKRV
RATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSLGDFTVPSSLATLIKLAWCSALHLEPWQGNGLVHFSRRTPFRKPA
SSDARPSSDDTPLSGGCSDTRKASDKKSGGSAVLWVKRGDVEAMQKAMERACYLVKYETKQHDGSGQRNYGCSRGPGRLL
DGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 2e-100 93
c5172 NP_757020.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-92 86
unnamed AAL67401.1 intergenic-region protein Not tested PAI II CFT073 Protein 5e-92 86
ORF_40 AAZ04449.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-92 86
APECO1_3496 YP_854315.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-92 86
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 6e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_3198 YP_001745181.1 hypothetical protein VFG1610 Protein 9e-101 93