Gene Information

Name : EcSMS35_3197 (EcSMS35_3197)
Accession : YP_001745180.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3276077 - 3276649 bp
Length : 573 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence : 
ATGAATGCTATCCCTTATTTCGACTATAGCATGGCGCCCTTCTGGCCATCTTATCAGAACAAAATCATCGGCGTTCTCAA
CCGTGTGTTGCGCGAGCAGTCCTGCTCCCGAATACGGCGGATCCTGCTTCGTCTGCCGGGGGAACATGGCAACATCTTCA
GCGACAGAAAAACCTGGTTCGGTATGGCCTTTATCGAAACCGTCAGTGCGCTGATGAATGCAACACCCGGACGTGACCTC
TGCTGGCTCCTGACTCGTCATCCTGAAAAACCGGAATACCACGTGGTGCTGTGCGTCAGACAGGAGTATTTCGACGGCCC
TGAACTGGATCGGCTGATTCTGGATGCCTGGAGCAACGTACTGGGCTTCGCGTCACCGGGTGAAGCGGCACCGTACCAGA
AACAGATAACCCGGGATGTGGTGCTGGACAGTTGTTCACCGGACTGCGAAGAGAGACTCAAAGAGCTGATATGGGCGTTC
AGTGATTTCGCCCGCGATCGTCGTGGTGTGCGCGATCCGGAAGCCCGTTACCTCGCCGGTAATCCCTGGTATCCCGTAGC
AGGCCAGCTCTGA

Protein sequence : 
MNAIPYFDYSMAPFWPSYQNKIIGVLNRVLREQSCSRIRRILLRLPGEHGNIFSDRKTWFGMAFIETVSALMNATPGRDL
CWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAAPYQKQITRDVVLDSCSPDCEERLKELIWAF
SDFARDRRGVRDPEARYLAGNPWYPVAGQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33738.1 hypothetical protein Not tested PAI I 536 Protein 4e-71 90
unnamed AAL67421.1 unknown Not tested PAI II CFT073 Protein 4e-57 89
c5193 NP_757041.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-72 89
unnamed CAD42061.1 hypothetical protein Not tested PAI II 536 Protein 3e-65 88
ORF_19 AAZ04429.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-68 87
APECO1_3515 YP_854260.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-68 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_3197 YP_001745180.1 hypothetical protein VFG1479 Protein 2e-71 90
EcSMS35_3197 YP_001745180.1 hypothetical protein VFG1580 Protein 1e-65 88