Name : sitC_2 (EcSMS35_3172) Accession : YP_001745166.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : iron/manganese transport system inner membrane protein SitC Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 3252911 - 3253768 bp Length : 858 bp Strand : + Note : identified by similarity to GB:AAT11266.1; match to protein family HMM PF00950; match to protein family HMM PF01032 DNA sequence : ATGAACGTGCTACTGGAACCCTTCAGCTATGAATATATGCTCAATGCGATGTGGGTCGCGGCGATGGTCGGCGGTCTCTG CGCTTTCCTGTCATGCTATCTGATGCTAAAAGGCTGGTCGCTGATTGGCGATGCGCTGTCGCACTCTATCGTCCCGGGTG TTGCGGGGGCATATATGCTGGGGCTTCCGTTTTCTCTGGGGGCCTTCTTTTCCGGTGGACTGGCTGCGGGCAGCATGCTG TTTCTTAACCAACGCACTCGCTTAAAAGAAGATGCCATCATCGGCCTGATCTTCTCGTCCTTTTTTGGCCTGGGGCTGTT TATGGTGTCATTAAACCCGACATCCGTAAATATTCAGACCATCGTCCTGGGCAATATTCTGGCAATCGCTCCGGCGGATA TCCTGCAACTCACTATCATTGGCATTGTCTCAGTCATCGTGCTGTTTTTCAAATGGAAAGATCTTATGGTGACCTTTTTC GACGAGAATCACGCCCGTGCTATTGGATTATATCCAGGAAGATTAAAAATCCTCTTCTTCACACTGCTGGCGGTATCGAC CGTTGCAGCATTGCAAACGGTTGGGGCTTTTCTGGTGATCTGTCTGGTAGTGACCCCTGGCGCAACAGCATGGTTGTTAA CCGATCGTTTTCCCCGCCTGCTCGTGATTGCTGTAACTATTGGCAGTGTAACCAGTTTCCTCGGCGCGTGGGTCAGTTAC TTTCTGGACGGAGCGACAGGTGGAATCATCGTGGTGGCGCAGACACTGCTGTTTCTTTTAGCATTTGTCTTTGCACCCAC CCATGGGCTTTTGGCAAATCGTCAGCGTGCGCATAAGGCGCTGGAGGATCGCTCATGA Protein sequence : MNVLLEPFSYEYMLNAMWVAAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSML FLNQRTRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPADILQLTIIGIVSVIVLFFKWKDLMVTFF DENHARAIGLYPGRLKILFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLVIAVTIGSVTSFLGAWVSY FLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRQRAHKALEDRS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 6e-90 | 87 |
sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 5e-90 | 87 |
sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 5e-90 | 87 |
sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 4e-90 | 87 |
sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 6e-90 | 87 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
sitC_2 | YP_001745166.1 | iron/manganese transport system inner membrane protein SitC | BAC0351 | Protein | 3e-90 | 87 |
sitC_2 | YP_001745166.1 | iron/manganese transport system inner membrane protein SitC | BAC0441 | Protein | 4e-66 | 67 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
sitC_2 | YP_001745166.1 | iron/manganese transport system inner membrane protein SitC | VFG0527 | Protein | 2e-90 | 87 |