Gene Information

Name : EcSMS35_3149 (EcSMS35_3149)
Accession : -
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3234133 - 3235299 bp
Length : 1167 bp
Strand : -
Note : IS100 transposase orfA; identified by match to protein family HMM PF00665; match to protein family HMM PF02796

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT
GGGGATCTCCCGCAATACGGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGATATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTCTGCGTAATG
GCCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGTTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAAACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC
CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA
CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG
AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCCTGGTGAAAATCTGGTGAACTTC
GACAAACACCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGATGATGGAACTGCAACATC
AACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCGCTGTCACAACAGGCAGTA
GACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 DNA 0.0 99.3
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 DNA 0.0 99.3
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 DNA 0.0 99.3
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 DNA 0.0 99.3
unnamed CAB46599.1 IS100 transposase Not tested HPI DNA 0.0 99.1
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 DNA 0.0 99.1
unnamed CAA21403.1 - Not tested HPI DNA 0.0 99.1
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI DNA 0.0 99.1
api83 CAF28557.1 transposase Not tested YAPI DNA 0.0 99.1
y2411 NP_669718.1 transposase Not tested HPI DNA 0.0 99.1
YPTB1585 YP_070113.1 transposase Not tested HPI DNA 0.0 99.1
unnamed AAG37051.1 unknown Not tested espC PAI DNA 0.0 98.1