|
Name : EcSMS35_3124 (EcSMS35_3124) Accession : YP_001745138.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : IS66 family transposase orfA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2963 EC number : - Position : 3210660 - 3211337 bp Length : 678 bp Strand : + Note : identified by match to protein family HMM PF01527 DNA sequence : ATGTCCATCATTTTTAATGGACACTATCGTATGAAACACCGGACCTGGATCACTGAAGCTTTACGTCTTCACTTTGAAGA ACATTTACCCCGGGTTGTGGCCGGGCGTCGCCTGGGTGTACCAAAATCAACAGTTTGTAGTATGTTCGTGCGCTTTCGGA GAGCTGGCCTTTCGTGGCCTTTGCCCGCAGGCATGTCGGAGCAGGAACTTGATGCCTGCCTTTACGGACAATTTTCCACG GTACCAGTCGTACGTCCTGAAAGCACCGTTATATCCGAAGCCCCCGTGGTAAAAAAACGTCCCCGGCGGCCCAACTTCCC TTATGAGTTTAAAATCGCCTTAGTGGAGCAGTCACTGCAGCCCGGAGCCTGTGTGGCGCAGATCGCCCGGGAAAACGGAA TCAACGATAACCTGCTCTTCAACTGGCGCCATCAATACCGGAAAGGTGGCCTGCTGCCTTCCGGAAAAAATATGCCGGCA CTGCTTCCCGTGACGTTAACGCCGGAGCCGGATAATAAAATCCCGGCCCCCGCACAGGAACCAGAGCAGATAAATACACC GTCCGACAGTCTGTGTTGTGAGCTGGTTCTGCCGGCCGGAACTCTCAGGCTTAAAGGTAAACTGACGCCGGCGTTATTAC AGACACTTATCCGCGAAATAAAAGGGAGCAGCCACTGA Protein sequence : MSIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWPLPAGMSEQELDACLYGQFST VPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPA LLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ADD91738.1 | hypothetical protein | Not tested | PAI-I AL862 | Protein | 4e-100 | 100 |
| aec51 | AAW51734.1 | Aec51 | Not tested | AGI-3 | Protein | 9e-106 | 100 |
| Z4315 | NP_289541.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-32 | 42 |
| ECO103_3552 | YP_003223419.1 | hypothetical protein | Not tested | LEE | Protein | 8e-33 | 41 |
