Gene Information

Name : EcSMS35_0310 (EcSMS35_0310)
Accession : YP_001742414.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : putative antitoxin module of toxin-antitoxin system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 317865 - 318182 bp
Length : 318 bp
Strand : +
Note : identified by similarity to SP:P52141; match to protein family HMM PF06154

DNA sequence :
ATGAGTAACATCACATGGGGCCTGCAGCGGGATATCACACCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAACT
GCATTATTTGGCTGACCGGGCCAGTATCACCGGTAAATTCAGTGACGCCGAATACCGGAAGCTGGATGAAACATTCCCGC
ACTTTATCAGCCAGATGGAATCGATGCTTACCACTGGTGAAATGAATCCTCGCCACGCCCACTGCGTCACCCTGTACCAC
GATGGTTTCACCTGCGAAGCCGATACCCTTGGCAGTTGCGGCTACGTATACATCGTCGTCTACTCCACTCAACGCTAA

Protein sequence :
MSNITWGLQRDITPRLGARLVQEGNQLHYLADRASITGKFSDAEYRKLDETFPHFISQMESMLTTGEMNPRHAHCVTLYH
DGFTCEADTLGSCGYVYIVVYSTQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-28 69
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 5e-27 67
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 3e-27 66
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-27 66
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-27 66
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-27 66
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 7e-28 66
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 1e-25 65
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 1e-26 65
Z1220 NP_286755.1 structural protein Not tested TAI Protein 1e-25 64
Z1658 NP_287161.1 structural protein Not tested TAI Protein 1e-25 64
unnamed AAL08477.1 unknown Not tested SRL Protein 1e-25 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_0310 YP_001742414.1 putative antitoxin module of toxin-antitoxin system VFG1619 Protein 1e-27 66
EcSMS35_0310 YP_001742414.1 putative antitoxin module of toxin-antitoxin system VFG0662 Protein 3e-28 66
EcSMS35_0310 YP_001742414.1 putative antitoxin module of toxin-antitoxin system VFG1681 Protein 4e-26 65
EcSMS35_0310 YP_001742414.1 putative antitoxin module of toxin-antitoxin system VFG1068 Protein 4e-26 62