Gene Information

Name : EcSMS35_0309 (EcSMS35_0309)
Accession : YP_001742413.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 317624 - 317845 bp
Length : 222 bp
Strand : +
Note : identified by similarity to GB:ABB61177.1; match to protein family HMM PF06174

DNA sequence :
ATGAGAATTATCAGTAAACGCCGGGCGATGACGATTTACCGTCAGCATCCGGCCTCCCGCATTTTTCGATACTGCACCGG
CAGATACCAGTGGCATGGCAGTGTCTGTCATTACACCGGTCTGGCTGTTCCTGACATTCCCGGCGTGCTGGTGGTATACG
CCGAACGCCGCCAGGACCGCAGCGGACCGTATGCCTGCCTGATGAGTATTACCCTGAATTGA

Protein sequence :
MRIISKRRAMTIYRQHPASRIFRYCTGRYQWHGSVCHYTGLAVPDIPGVLVVYAERRQDRSGPYACLMSITLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00480.1 unknown Not tested SHI-1 Protein 8e-17 68
yeeT CAE85202.1 YeeT protein Not tested PAI V 536 Protein 5e-19 65
yeeT CAD42099.1 hypothetical protein Not tested PAI II 536 Protein 5e-19 65
unnamed CAD66204.1 hypothetical protein Not tested PAI III 536 Protein 5e-19 65
Z1218 NP_286753.1 hypothetical protein Not tested TAI Protein 1e-18 65
yeeT NP_838485.1 hypothetical protein Not tested SHI-1 Protein 8e-19 65
yeeT NP_708771.1 hypothetical protein Not tested SHI-1 Protein 8e-19 65
unnamed AAL08476.1 unknown Not tested SRL Protein 9e-19 65
aec74 AAW51757.1 Aec74 Not tested AGI-3 Protein 6e-19 64
ECO103_3590 YP_003223447.1 hypothetical protein Not tested LEE Protein 4e-18 64
c5151 NP_756999.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-18 64
unnamed AAL67344.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-18 64
yeeT AAZ04459.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-18 64
yeeT AAK16199.1 YeeT Not tested PAI-I AL862 Protein 1e-18 64
unnamed CAI43847.1 hypothetical protein Not tested LEE Protein 3e-18 62
yeeT ADD91701.1 YeeT Not tested PAI-I AL862 Protein 1e-18 62
yeeT CAD33788.1 YeeT protein Not tested PAI I 536 Protein 1e-18 62
unnamed AAL57578.1 unknown Not tested LEE Protein 2e-15 58
unnamed CAI43902.1 hypothetical protein Not tested LEE Protein 2e-15 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_0309 YP_001742413.1 hypothetical protein VFG1679 Protein 2e-19 65
EcSMS35_0309 YP_001742413.1 hypothetical protein VFG1067 Protein 4e-19 65
EcSMS35_0309 YP_001742413.1 hypothetical protein VFG0661 Protein 2e-19 65
EcSMS35_0309 YP_001742413.1 hypothetical protein VFG1618 Protein 2e-19 65
EcSMS35_0309 YP_001742413.1 hypothetical protein VFG1529 Protein 6e-19 62