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Name : gabD (EcSMS35_2781) Accession : YP_001744810.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2864889 - 2866337 bp Length : 1449 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCTGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCTCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGCAAACCACTGGCCGAAGCGAAAGG CGAAATCAGCTACGCCGCCTCATTTATTGAGTGGTTTGCTGAAGAAGGCAAACGTATTTATGGCGACACCATTCCCGGTC ATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCGGCTATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGTAAAGCAGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAGCCCGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCAGAACTGGCGATTCGCGCGGGCGTTCCGGCTGGCGTGTTTAACGTGGTCACCGGTTCGGCGG GCGCGGTCGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAGCTGTCGTTTACCGGCTCGACCGAAATTGGCCGCCAG TTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTTATCGTCTTTGACGA TGCCGACCTCGACAAAGCCGTGGAAGGCGCACTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC GTTTATACGTGCAGAACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGCAAC GGGCTGGAGAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCACATGAACGCGGCGGTAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCGGCTAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTTGCCCCGCTATTCCGCTTTAAAGATGAA GCCGATGTGATTGCGCAGGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGCATTATTTCCAATGAAGTGGCCCCGTTCGGCG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQNGVYDRFAEKLQQAVSKLHIGN GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-158 | 67 |
